RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
TPM4-216ENST00000592822 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.82
TPM4-216ENST00000592822 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
TPM4-216ENST00000592822 KRTAP19-5Q3LI72 72 aa3.69□□□□□ -1.82
TPM4-216ENST00000592822 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
TPM4-216ENST00000592822 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
TPM4-216ENST00000592822 CDC42SE1Q9NRR8 79 aa3.69□□□□□ -1.82
TPM4-216ENST00000592822 MT1EP04732 61 aa3.68□□□□□ -1.82
TPM4-216ENST00000592822 KRTAP25-1Q3LHN0 102 aa3.66□□□□□ -1.82
TPM4-216ENST00000592822 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
TPM4-216ENST00000592822 SPRR2DP22532 72 aa3.63□□□□□ -1.83
TPM4-216ENST00000592822 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
TPM4-216ENST00000592822 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
TPM4-216ENST00000592822 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
TPM4-216ENST00000592822 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
TPM4-216ENST00000592822 ROMO1P60602 79 aa3.57□□□□□ -1.84
TPM4-216ENST00000592822 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
TPM4-216ENST00000592822 MT1LQ93083 61 aa3.55□□□□□ -1.84
TPM4-216ENST00000592822 MT1GP13640 62 aa3.54□□□□□ -1.84
TPM4-216ENST00000592822 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
TPM4-216ENST00000592822 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
TPM4-216ENST00000592822 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
TPM4-216ENST00000592822 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
TPM4-216ENST00000592822 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
TPM4-216ENST00000592822 MT1MQ8N339 61 aa3.49□□□□□ -1.85
TPM4-216ENST00000592822 KRTAP15-1Q3LI76 137 aa3.47□□□□□ -1.85
TPM4-216ENST00000592822 SVIPQ8NHG7 77 aa3.43□□□□□ -1.86
TPM4-216ENST00000592822 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
TPM4-216ENST00000592822 DSTQ03001 7570 aaKnown RBP3.4□□□□□ -1.86
TPM4-216ENST00000592822 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
TPM4-216ENST00000592822 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
TPM4-216ENST00000592822 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
TPM4-216ENST00000592822 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
TPM4-216ENST00000592822 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
TPM4-216ENST00000592822 MT4P47944 62 aa3.17□□□□□ -1.9
TPM4-216ENST00000592822 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
TPM4-216ENST00000592822 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
TPM4-216ENST00000592822 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
TPM4-216ENST00000592822 A0A0A0MQY5 61 aa3.03□□□□□ -1.92
TPM4-216ENST00000592822 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
TPM4-216ENST00000592822 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.92
TPM4-216ENST00000592822 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
TPM4-216ENST00000592822 MT1AP04731 61 aa3.02□□□□□ -1.93
TPM4-216ENST00000592822 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
TPM4-216ENST00000592822 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
TPM4-216ENST00000592822 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
TPM4-216ENST00000592822 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
TPM4-216ENST00000592822 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
TPM4-216ENST00000592822 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
TPM4-216ENST00000592822 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
TPM4-216ENST00000592822 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
TPM4-216ENST00000592822 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
TPM4-216ENST00000592822 MT3P25713 68 aa2.74□□□□□ -1.97
TPM4-216ENST00000592822 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
TPM4-216ENST00000592822 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
TPM4-216ENST00000592822 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
TPM4-216ENST00000592822 LUZP6Q538Z0 58 aa2.58□□□□□ -2
TPM4-216ENST00000592822 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
TPM4-216ENST00000592822 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
TPM4-216ENST00000592822 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
TPM4-216ENST00000592822 NDUFAF8A1L188 74 aa2.43□□□□□ -2.02
TPM4-216ENST00000592822 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
TPM4-216ENST00000592822 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
TPM4-216ENST00000592822 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
TPM4-216ENST00000592822 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
TPM4-216ENST00000592822 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
TPM4-216ENST00000592822 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
TPM4-216ENST00000592822 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
TPM4-216ENST00000592822 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
TPM4-216ENST00000592822 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
TPM4-216ENST00000592822 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
TPM4-216ENST00000592822 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
TPM4-216ENST00000592822 INE1O15225 51 aa1.85□□□□□ -2.11
TPM4-216ENST00000592822 PRM1P04553 51 aa1.85□□□□□ -2.11
TPM4-216ENST00000592822 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
TPM4-216ENST00000592822 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.16
TPM4-216ENST00000592822 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
TPM4-216ENST00000592822 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 176.9 ms