RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 K7ERS5 55 aa4.66□□□□□ -1.66
DDX39A-218ENST00000592632 MT1GP13640 62 aa4.66□□□□□ -1.66
DDX39A-218ENST00000592632 A6NED7 52 aa4.64□□□□□ -1.67
DDX39A-218ENST00000592632 MT1LQ93083 61 aa4.64□□□□□ -1.67
DDX39A-218ENST00000592632 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
DDX39A-218ENST00000592632 GPR98Q8WXG9 6306 aa4.63□□□□□ -1.67
DDX39A-218ENST00000592632 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
DDX39A-218ENST00000592632 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
DDX39A-218ENST00000592632 MT1MQ8N339 61 aa4.59□□□□□ -1.67
DDX39A-218ENST00000592632 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
DDX39A-218ENST00000592632 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
DDX39A-218ENST00000592632 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
DDX39A-218ENST00000592632 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
DDX39A-218ENST00000592632 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
DDX39A-218ENST00000592632 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
DDX39A-218ENST00000592632 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
DDX39A-218ENST00000592632 MT4P47944 62 aa4.42□□□□□ -1.7
DDX39A-218ENST00000592632 ROMO1P60602 79 aa4.42□□□□□ -1.7
DDX39A-218ENST00000592632 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
DDX39A-218ENST00000592632 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
DDX39A-218ENST00000592632 KRTAP15-1Q3LI76 137 aa4.33□□□□□ -1.72
DDX39A-218ENST00000592632 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
DDX39A-218ENST00000592632 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
DDX39A-218ENST00000592632 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
DDX39A-218ENST00000592632 KRTAP5-10Q6L8G5 202 aa4.24□□□□□ -1.73
DDX39A-218ENST00000592632 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
DDX39A-218ENST00000592632 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
DDX39A-218ENST00000592632 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
DDX39A-218ENST00000592632 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
DDX39A-218ENST00000592632 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
DDX39A-218ENST00000592632 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
DDX39A-218ENST00000592632 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
DDX39A-218ENST00000592632 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
DDX39A-218ENST00000592632 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
DDX39A-218ENST00000592632 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
DDX39A-218ENST00000592632 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
DDX39A-218ENST00000592632 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
DDX39A-218ENST00000592632 MT1AP04731 61 aa3.94□□□□□ -1.78
DDX39A-218ENST00000592632 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
DDX39A-218ENST00000592632 PMAIP1Q13794 54 aa3.91□□□□□ -1.78
DDX39A-218ENST00000592632 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
DDX39A-218ENST00000592632 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
DDX39A-218ENST00000592632 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
DDX39A-218ENST00000592632 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
DDX39A-218ENST00000592632 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
DDX39A-218ENST00000592632 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
DDX39A-218ENST00000592632 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
DDX39A-218ENST00000592632 MT3P25713 68 aa3.6□□□□□ -1.83
DDX39A-218ENST00000592632 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
DDX39A-218ENST00000592632 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
DDX39A-218ENST00000592632 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
DDX39A-218ENST00000592632 KTN1-AS1Q86SY8 53 aa3.52□□□□□ -1.85
DDX39A-218ENST00000592632 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
DDX39A-218ENST00000592632 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
DDX39A-218ENST00000592632 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
DDX39A-218ENST00000592632 SVIPQ8NHG7 77 aa3.35□□□□□ -1.87
DDX39A-218ENST00000592632 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
DDX39A-218ENST00000592632 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
DDX39A-218ENST00000592632 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
DDX39A-218ENST00000592632 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
DDX39A-218ENST00000592632 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
DDX39A-218ENST00000592632 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
DDX39A-218ENST00000592632 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
DDX39A-218ENST00000592632 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
DDX39A-218ENST00000592632 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
DDX39A-218ENST00000592632 H3BS24 57 aa2.76□□□□□ -1.97
DDX39A-218ENST00000592632 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
DDX39A-218ENST00000592632 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
DDX39A-218ENST00000592632 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
DDX39A-218ENST00000592632 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
DDX39A-218ENST00000592632 A0A0A0MQY5 61 aa2.55□□□□□ -2
DDX39A-218ENST00000592632 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
DDX39A-218ENST00000592632 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
DDX39A-218ENST00000592632 PRM1P04553 51 aa2.27□□□□□ -2.05
DDX39A-218ENST00000592632 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
DDX39A-218ENST00000592632 INE1O15225 51 aa2.11□□□□□ -2.07
DDX39A-218ENST00000592632 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
DDX39A-218ENST00000592632 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms