RNA–Protein interactions for RNA: ENST00000592599.5

SAFB2-211, Transcript of scaffold attachment factor B2, human

TSL 2

Gene SAFB2, Length 2,260 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAFB2-211	ENST00000592599	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.03	□□□□□ -1.6
SAFB2-211	ENST00000592599	SPRR2F	Q96RM1	72 aa		5.02	□□□□□ -1.61
SAFB2-211	ENST00000592599	MT1E	P04732	61 aa		5	□□□□□ -1.61
SAFB2-211	ENST00000592599	MDN1	Q9NU22	5596 aa		4.95	□□□□□ -1.62
SAFB2-211	ENST00000592599	MT1L	Q93083	61 aa		4.89	□□□□□ -1.63
SAFB2-211	ENST00000592599	KRTAP5-9	P26371	169 aa		4.87	□□□□□ -1.63
SAFB2-211	ENST00000592599	KRTAP4-7	Q9BYR0	210 aa		4.87	□□□□□ -1.63
SAFB2-211	ENST00000592599	KRTAP6-3	Q3LI67	103 aa		4.81	□□□□□ -1.64
SAFB2-211	ENST00000592599	KRTAP19-3	Q7Z4W3	81 aa		4.81	□□□□□ -1.64
SAFB2-211	ENST00000592599	KRTAP9-7	A8MTY7	169 aa		4.79	□□□□□ -1.64
SAFB2-211	ENST00000592599	LCE3C	Q5T5A8	94 aa		4.77	□□□□□ -1.65
SAFB2-211	ENST00000592599	DST	Q03001	7570 aa	Known RBP	4.77	□□□□□ -1.65
SAFB2-211	ENST00000592599	SPRR2E	P22531	72 aa		4.76	□□□□□ -1.65
SAFB2-211	ENST00000592599	SPRR2B	P35325	72 aa		4.76	□□□□□ -1.65
SAFB2-211	ENST00000592599	SPRR2A	P35326	72 aa		4.76	□□□□□ -1.65
SAFB2-211	ENST00000592599	KRTAP19-4	Q3LI73	84 aa		4.76	□□□□□ -1.65
SAFB2-211	ENST00000592599	LCE1A	Q5T7P2	110 aa		4.76	□□□□□ -1.65
SAFB2-211	ENST00000592599	KRTAP4-3	Q9BYR4	195 aa		4.75	□□□□□ -1.65
SAFB2-211	ENST00000592599	LCE5A	Q5TCM9	118 aa		4.73	□□□□□ -1.65
SAFB2-211	ENST00000592599	MT1G	P13640	62 aa		4.72	□□□□□ -1.65
SAFB2-211	ENST00000592599	MT1M	Q8N339	61 aa		4.72	□□□□□ -1.65
SAFB2-211	ENST00000592599	KRTAP2-2	Q9BYT5	123 aa		4.64	□□□□□ -1.67
SAFB2-211	ENST00000592599	KRTAP9-6	A8MVA2	160 aa		4.6	□□□□□ -1.67
SAFB2-211	ENST00000592599	NEB	P20929	6669 aa		4.59	□□□□□ -1.67
SAFB2-211	ENST00000592599	SPRR2D	P22532	72 aa		4.58	□□□□□ -1.68
SAFB2-211	ENST00000592599	LOC100996750	A0A140TA64	210 aa		4.57	□□□□□ -1.68
SAFB2-211	ENST00000592599	LCE3B	Q5TA77	95 aa		4.4	□□□□□ -1.71
SAFB2-211	ENST00000592599	KRTAP2-3	P0C7H8	128 aa		4.39	□□□□□ -1.71
SAFB2-211	ENST00000592599	KRTAP2-4	Q9BYR9	128 aa		4.39	□□□□□ -1.71
SAFB2-211	ENST00000592599	KRTAP2-1	Q9BYU5	128 aa		4.39	□□□□□ -1.71
SAFB2-211	ENST00000592599	KRTAP9-4	Q9BYQ2	154 aa		4.35	□□□□□ -1.71
SAFB2-211	ENST00000592599	LCE1F	Q5T754	118 aa		4.23	□□□□□ -1.73
SAFB2-211	ENST00000592599	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.23	□□□□□ -1.73
SAFB2-211	ENST00000592599	MT3	P25713	68 aa		4.21	□□□□□ -1.74
SAFB2-211	ENST00000592599	KRTAP20-1	Q3LI63	56 aa		4.21	□□□□□ -1.74
SAFB2-211	ENST00000592599	SYNE1	Q8NF91	8797 aa	Known RBP	4.2	□□□□□ -1.74
SAFB2-211	ENST00000592599	KRTAP6-1	Q3LI64	71 aa		4.17	□□□□□ -1.74
SAFB2-211	ENST00000592599	KRTAP4-6	Q9BYQ5	205 aa		4.15	□□□□□ -1.74
SAFB2-211	ENST00000592599	MT1A	P04731	61 aa		4.11	□□□□□ -1.75
SAFB2-211	ENST00000592599	KRTAP4-9	Q9BYQ8	210 aa		4.06	□□□□□ -1.76
SAFB2-211	ENST00000592599	MT4	P47944	62 aa		4.06	□□□□□ -1.76
SAFB2-211	ENST00000592599	KRTAP9-9	Q9BYP9	154 aa		4.06	□□□□□ -1.76
SAFB2-211	ENST00000592599	KRTAP5-4	Q6L8H1	288 aa		4.04	□□□□□ -1.76
SAFB2-211	ENST00000592599	LCE4A	Q5TA78	99 aa		3.96	□□□□□ -1.78
SAFB2-211	ENST00000592599	LCE1D	Q5T752	114 aa		3.95	□□□□□ -1.78
SAFB2-211	ENST00000592599	HMCN1	Q96RW7	5635 aa		3.94	□□□□□ -1.78
SAFB2-211	ENST00000592599	KRTAP12-4	P60329	112 aa		3.94	□□□□□ -1.78
SAFB2-211	ENST00000592599	LCE1E	Q5T753	118 aa		3.94	□□□□□ -1.78
SAFB2-211	ENST00000592599	KRTAP6-2	Q3LI66	62 aa		3.86	□□□□□ -1.79
SAFB2-211	ENST00000592599	OBSCN	Q5VST9	7968 aa		3.84	□□□□□ -1.79
SAFB2-211	ENST00000592599	KRTAP20-2	Q3LI61	65 aa		3.83	□□□□□ -1.8
SAFB2-211	ENST00000592599	KRTAP5-3	Q6L8H2	238 aa		3.68	□□□□□ -1.82
SAFB2-211	ENST00000592599	KRTAP5-2	Q701N4	177 aa		3.65	□□□□□ -1.83
SAFB2-211	ENST00000592599	LCE3D	Q9BYE3	92 aa		3.59	□□□□□ -1.84
SAFB2-211	ENST00000592599	LCE3E	Q5T5B0	92 aa		3.57	□□□□□ -1.84
SAFB2-211	ENST00000592599	AHNAK2	Q8IVF2	5795 aa		3.47	□□□□□ -1.85
SAFB2-211	ENST00000592599	PRM1	P04553	51 aa		3.4	□□□□□ -1.87
SAFB2-211	ENST00000592599	KRTAP4-11	Q9BYQ6	195 aa		3.35	□□□□□ -1.87
SAFB2-211	ENST00000592599	KRTAP5-10	Q6L8G5	202 aa		3.26	□□□□□ -1.89
SAFB2-211	ENST00000592599	KRTAP5-8	O75690	187 aa		3.22	□□□□□ -1.89
SAFB2-211	ENST00000592599	KRTAP5-1	Q6L8H4	278 aa		3.21	□□□□□ -1.9
SAFB2-211	ENST00000592599	GPR98	Q8WXG9	6306 aa		3.18	□□□□□ -1.9
SAFB2-211	ENST00000592599	LCE1B	Q5T7P3	118 aa		3.17	□□□□□ -1.9
SAFB2-211	ENST00000592599	MUC5AC	P98088	5654 aa		3.13	□□□□□ -1.91
SAFB2-211	ENST00000592599	KRTAP4-2	Q9BYR5	136 aa		3.1	□□□□□ -1.91
SAFB2-211	ENST00000592599	KRTAP4-12	Q9BQ66	201 aa		3.07	□□□□□ -1.92
SAFB2-211	ENST00000592599	LCE1C	Q5T751	118 aa		3	□□□□□ -1.93
SAFB2-211	ENST00000592599	KRTAP5-7	Q6L8G8	165 aa		3	□□□□□ -1.93
SAFB2-211	ENST00000592599	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.91	□□□□□ -1.94
SAFB2-211	ENST00000592599	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.76	□□□□□ -1.97
SAFB2-211	ENST00000592599	KRTAP21-2	Q3LI59	83 aa		2.7	□□□□□ -1.98
SAFB2-211	ENST00000592599	KRTAP5-11	Q6L8G4	156 aa		2.65	□□□□□ -1.99
SAFB2-211	ENST00000592599	AHNAK	Q09666	5890 aa	Known RBP	2.58	□□□□□ -2
SAFB2-211	ENST00000592599	KRTAP4-4	Q9BYR3	166 aa		2.54	□□□□□ -2
SAFB2-211	ENST00000592599	PHGR1	C9JFL3	82 aa		2.3	□□□□□ -2.04
SAFB2-211	ENST00000592599	MUC19	Q7Z5P9	8384 aa		2.29	□□□□□ -2.04
SAFB2-211	ENST00000592599	KRTAP21-1	Q3LI58	79 aa		2.17	□□□□□ -2.06
SAFB2-211	ENST00000592599	MUC16	Q8WXI7	14507 aa		1.45	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms