RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 TNP1P09430 55 aa6.45□□□□□ -1.38
PRKCSH-216ENST00000592445 SYNE1Q8NF91 8797 aaKnown RBP6.39□□□□□ -1.39
PRKCSH-216ENST00000592445 COA5Q86WW8 74 aa6.37□□□□□ -1.39
PRKCSH-216ENST00000592445 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
PRKCSH-216ENST00000592445 SMIM26A0A096LP01 95 aa6.29□□□□□ -1.4
PRKCSH-216ENST00000592445 A0A1B0GV90 55 aa6.28□□□□□ -1.4
PRKCSH-216ENST00000592445 KRTAP4-11Q9BYQ6 195 aa6.26□□□□□ -1.41
PRKCSH-216ENST00000592445 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
PRKCSH-216ENST00000592445 A8MU10 97 aa6.24□□□□□ -1.41
PRKCSH-216ENST00000592445 AHNAKQ09666 5890 aaKnown RBP6.23□□□□□ -1.41
PRKCSH-216ENST00000592445 MUC5ACP98088 5654 aa6.16□□□□□ -1.42
PRKCSH-216ENST00000592445 MUC5BQ9HC84 5762 aaPredicted RBP6.14□□□□□ -1.43
PRKCSH-216ENST00000592445 SERP2Q8N6R1 65 aa6.1□□□□□ -1.43
PRKCSH-216ENST00000592445 A0A1B0GU69 56 aa6.09□□□□□ -1.43
PRKCSH-216ENST00000592445 KRTAP5-8O75690 187 aa6.05□□□□□ -1.44
PRKCSH-216ENST00000592445 KRTAP5-2Q701N4 177 aa6.04□□□□□ -1.44
PRKCSH-216ENST00000592445 K7ERU9 68 aa5.93□□□□□ -1.46
PRKCSH-216ENST00000592445 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
PRKCSH-216ENST00000592445 OBSCNQ5VST9 7968 aa5.89□□□□□ -1.47
PRKCSH-216ENST00000592445 KRTAP6-1Q3LI64 71 aa5.88□□□□□ -1.47
PRKCSH-216ENST00000592445 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
PRKCSH-216ENST00000592445 MT1AP04731 61 aa5.86□□□□□ -1.47
PRKCSH-216ENST00000592445 H7BZZ5 65 aa5.78□□□□□ -1.48
PRKCSH-216ENST00000592445 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
PRKCSH-216ENST00000592445 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
PRKCSH-216ENST00000592445 KRTAP6-2Q3LI66 62 aa5.75□□□□□ -1.49
PRKCSH-216ENST00000592445 PRR15LQ9BU68 103 aa5.74□□□□□ -1.49
PRKCSH-216ENST00000592445 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
PRKCSH-216ENST00000592445 COX7CP15954 63 aa5.72□□□□□ -1.49
PRKCSH-216ENST00000592445 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
PRKCSH-216ENST00000592445 KRTAP5-1Q6L8H4 278 aa5.52□□□□□ -1.53
PRKCSH-216ENST00000592445 UQCR11O14957 56 aa5.51□□□□□ -1.53
PRKCSH-216ENST00000592445 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
PRKCSH-216ENST00000592445 LINC01558Q9Y6Z2 57 aa5.49□□□□□ -1.53
PRKCSH-216ENST00000592445 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
PRKCSH-216ENST00000592445 MT3P25713 68 aa5.41□□□□□ -1.54
PRKCSH-216ENST00000592445 K7ERS5 55 aa5.39□□□□□ -1.55
PRKCSH-216ENST00000592445 MIR22HGQ0VDD5 57 aa5.34□□□□□ -1.55
PRKCSH-216ENST00000592445 ATP5EP56381 51 aaPredicted RBP5.25□□□□□ -1.57
PRKCSH-216ENST00000592445 ANAPC13Q9BS18 74 aa5.2□□□□□ -1.58
PRKCSH-216ENST00000592445 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
PRKCSH-216ENST00000592445 CCDC179H3BU77 68 aa5.12□□□□□ -1.59
PRKCSH-216ENST00000592445 LCE1EQ5T753 118 aa5.08□□□□□ -1.6
PRKCSH-216ENST00000592445 CDC42SE1Q9NRR8 79 aa5□□□□□ -1.61
PRKCSH-216ENST00000592445 Q1T7F1 81 aa4.93□□□□□ -1.62
PRKCSH-216ENST00000592445 PSPHP1O15172 72 aa4.9□□□□□ -1.63
PRKCSH-216ENST00000592445 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.63
PRKCSH-216ENST00000592445 TMEM258P61165 79 aa4.87□□□□□ -1.63
PRKCSH-216ENST00000592445 ROMO1P60602 79 aa4.86□□□□□ -1.63
PRKCSH-216ENST00000592445 KRTAP4-2Q9BYR5 136 aa4.85□□□□□ -1.63
PRKCSH-216ENST00000592445 V9GYY9 64 aa4.77□□□□□ -1.65
PRKCSH-216ENST00000592445 LCE1CQ5T751 118 aa4.72□□□□□ -1.65
PRKCSH-216ENST00000592445 PCP4P48539 62 aa4.71□□□□□ -1.66
PRKCSH-216ENST00000592445 A6NED7 52 aa4.7□□□□□ -1.66
PRKCSH-216ENST00000592445 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
PRKCSH-216ENST00000592445 KRTAP5-11Q6L8G4 156 aa4.38□□□□□ -1.71
PRKCSH-216ENST00000592445 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
PRKCSH-216ENST00000592445 PHGR1C9JFL3 82 aa4.26□□□□□ -1.73
PRKCSH-216ENST00000592445 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
PRKCSH-216ENST00000592445 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
PRKCSH-216ENST00000592445 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
PRKCSH-216ENST00000592445 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
PRKCSH-216ENST00000592445 PRO0628Q9UI54 55 aa3.81□□□□□ -1.8
PRKCSH-216ENST00000592445 PMAIP1Q13794 54 aa3.73□□□□□ -1.81
PRKCSH-216ENST00000592445 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
PRKCSH-216ENST00000592445 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
PRKCSH-216ENST00000592445 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
PRKCSH-216ENST00000592445 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
PRKCSH-216ENST00000592445 SVIPQ8NHG7 77 aa3.53□□□□□ -1.84
PRKCSH-216ENST00000592445 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
PRKCSH-216ENST00000592445 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
PRKCSH-216ENST00000592445 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
PRKCSH-216ENST00000592445 H3BS24 57 aa2.81□□□□□ -1.96
PRKCSH-216ENST00000592445 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
PRKCSH-216ENST00000592445 MUC16Q8WXI7 14507 aa2.57□□□□□ -2
PRKCSH-216ENST00000592445 A0A0A0MQY5 61 aa2.54□□□□□ -2
PRKCSH-216ENST00000592445 PRM1P04553 51 aa2.46□□□□□ -2.02
PRKCSH-216ENST00000592445 INE1O15225 51 aa2.3□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 62.4 ms