RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	PP632	Q6XCG6	107 aa		6.52	□□□□□ -1.37
CIRBP-238	ENST00000592412	KRTAP12-1	P59990	96 aa		6.51	□□□□□ -1.37
CIRBP-238	ENST00000592412	KRTAP4-6	Q9BYQ5	205 aa		6.49	□□□□□ -1.37
CIRBP-238	ENST00000592412		A8MU10	97 aa		6.48	□□□□□ -1.37
CIRBP-238	ENST00000592412	MT1L	Q93083	61 aa		6.48	□□□□□ -1.37
CIRBP-238	ENST00000592412	KRTAP4-3	Q9BYR4	195 aa		6.46	□□□□□ -1.38
CIRBP-238	ENST00000592412	PCP4	P48539	62 aa		6.41	□□□□□ -1.38
CIRBP-238	ENST00000592412	KRTAP5-7	Q6L8G8	165 aa		6.38	□□□□□ -1.39
CIRBP-238	ENST00000592412	UQCR11	O14957	56 aa		6.35	□□□□□ -1.39
CIRBP-238	ENST00000592412	KRTAP5-3	Q6L8H2	238 aa		6.33	□□□□□ -1.4
CIRBP-238	ENST00000592412		V9GYY9	64 aa		6.3	□□□□□ -1.4
CIRBP-238	ENST00000592412	PSPHP1	O15172	72 aa		6.26	□□□□□ -1.41
CIRBP-238	ENST00000592412		Q1T7F1	81 aa		6.26	□□□□□ -1.41
CIRBP-238	ENST00000592412	C10orf95	Q9H7T3	257 aa		6.24	□□□□□ -1.41
CIRBP-238	ENST00000592412	MIR22HG	Q0VDD5	57 aa		6.23	□□□□□ -1.41
CIRBP-238	ENST00000592412	LCE3A	Q5TA76	89 aa		6.22	□□□□□ -1.41
CIRBP-238	ENST00000592412	KRTAP20-2	Q3LI61	65 aa		6.18	□□□□□ -1.42
CIRBP-238	ENST00000592412	KRTAP4-7	Q9BYR0	210 aa		6.18	□□□□□ -1.42
CIRBP-238	ENST00000592412	TNP1	P09430	55 aa		6.16	□□□□□ -1.42
CIRBP-238	ENST00000592412	RPS28	P62857	69 aa	Known RBP	6.15	□□□□□ -1.42
CIRBP-238	ENST00000592412		K7ERS5	55 aa		6.09	□□□□□ -1.43
CIRBP-238	ENST00000592412	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.09	□□□□□ -1.43
CIRBP-238	ENST00000592412	SPRR5	A0A1B0GTR4	108 aa		6.06	□□□□□ -1.44
CIRBP-238	ENST00000592412		A6NED7	52 aa		6.05	□□□□□ -1.44
CIRBP-238	ENST00000592412	SYNE1	Q8NF91	8797 aa	Known RBP	6	□□□□□ -1.45
CIRBP-238	ENST00000592412	KRTAP12-3	P60328	96 aa		5.94	□□□□□ -1.46
CIRBP-238	ENST00000592412	KRTAP12-4	P60329	112 aa		5.93	□□□□□ -1.46
CIRBP-238	ENST00000592412	KRTAP25-1	Q3LHN0	102 aa		5.92	□□□□□ -1.46
CIRBP-238	ENST00000592412	LOC100996750	A0A140TA64	210 aa		5.87	□□□□□ -1.47
CIRBP-238	ENST00000592412	CDC42SE1	Q9NRR8	79 aa		5.81	□□□□□ -1.48
CIRBP-238	ENST00000592412	KRTAP4-11	Q9BYQ6	195 aa		5.74	□□□□□ -1.49
CIRBP-238	ENST00000592412	ROMO1	P60602	79 aa		5.7	□□□□□ -1.5
CIRBP-238	ENST00000592412	KRTAP23-1	A1A580	65 aa		5.69	□□□□□ -1.5
CIRBP-238	ENST00000592412	AHNAK	Q09666	5890 aa	Known RBP	5.66	□□□□□ -1.5
CIRBP-238	ENST00000592412	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.65	□□□□□ -1.5
CIRBP-238	ENST00000592412	KRTAP5-2	Q701N4	177 aa		5.65	□□□□□ -1.5
CIRBP-238	ENST00000592412	MUC5AC	P98088	5654 aa		5.64	□□□□□ -1.51
CIRBP-238	ENST00000592412	KRTAP5-8	O75690	187 aa		5.59	□□□□□ -1.51
CIRBP-238	ENST00000592412	KRTAP6-1	Q3LI64	71 aa		5.51	□□□□□ -1.53
CIRBP-238	ENST00000592412	KRTAP15-1	Q3LI76	137 aa		5.51	□□□□□ -1.53
CIRBP-238	ENST00000592412	BRK1	Q8WUW1	75 aa		5.51	□□□□□ -1.53
CIRBP-238	ENST00000592412	KRTAP19-4	Q3LI73	84 aa		5.5	□□□□□ -1.53
CIRBP-238	ENST00000592412	MT1A	P04731	61 aa		5.48	□□□□□ -1.53
CIRBP-238	ENST00000592412	OBSCN	Q5VST9	7968 aa		5.48	□□□□□ -1.53
CIRBP-238	ENST00000592412	LCE3C	Q5T5A8	94 aa		5.43	□□□□□ -1.54
CIRBP-238	ENST00000592412	KRTAP6-2	Q3LI66	62 aa		5.34	□□□□□ -1.55
CIRBP-238	ENST00000592412	KRTAP9-4	Q9BYQ2	154 aa		5.34	□□□□□ -1.55
CIRBP-238	ENST00000592412	KRTAP9-9	Q9BYP9	154 aa		5.3	□□□□□ -1.56
CIRBP-238	ENST00000592412	KRTAP9-6	A8MVA2	160 aa		5.23	□□□□□ -1.57
CIRBP-238	ENST00000592412	PMAIP1	Q13794	54 aa		5.16	□□□□□ -1.58
CIRBP-238	ENST00000592412	KRTAP5-1	Q6L8H4	278 aa		5.16	□□□□□ -1.58
CIRBP-238	ENST00000592412	MT3	P25713	68 aa		5	□□□□□ -1.61
CIRBP-238	ENST00000592412	PRO0628	Q9UI54	55 aa		5	□□□□□ -1.61
CIRBP-238	ENST00000592412	PRAC1	Q96KF2	57 aa		4.98	□□□□□ -1.61
CIRBP-238	ENST00000592412	KTN1-AS1	Q86SY8	53 aa		4.74	□□□□□ -1.65
CIRBP-238	ENST00000592412	LCE1E	Q5T753	118 aa		4.71	□□□□□ -1.66
CIRBP-238	ENST00000592412	KRTAP4-2	Q9BYR5	136 aa		4.56	□□□□□ -1.68
CIRBP-238	ENST00000592412	SVIP	Q8NHG7	77 aa		4.55	□□□□□ -1.68
CIRBP-238	ENST00000592412	LCE1B	Q5T7P3	118 aa		4.47	□□□□□ -1.69
CIRBP-238	ENST00000592412	LCE1C	Q5T751	118 aa		4.39	□□□□□ -1.71
CIRBP-238	ENST00000592412	KRTAP4-12	Q9BQ66	201 aa		4.27	□□□□□ -1.73
CIRBP-238	ENST00000592412	LUZP6	Q538Z0	58 aa		4.11	□□□□□ -1.75
CIRBP-238	ENST00000592412	KRTAP5-11	Q6L8G4	156 aa		4.07	□□□□□ -1.76
CIRBP-238	ENST00000592412	LCE1F	Q5T754	118 aa		3.98	□□□□□ -1.77
CIRBP-238	ENST00000592412	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.96	□□□□□ -1.78
CIRBP-238	ENST00000592412	LCE3D	Q9BYE3	92 aa		3.92	□□□□□ -1.78
CIRBP-238	ENST00000592412	PHGR1	C9JFL3	82 aa		3.83	□□□□□ -1.8
CIRBP-238	ENST00000592412	LCE3E	Q5T5B0	92 aa		3.73	□□□□□ -1.81
CIRBP-238	ENST00000592412	KRTAP21-2	Q3LI59	83 aa		3.65	□□□□□ -1.83
CIRBP-238	ENST00000592412	NDUFAF8	A1L188	74 aa		3.57	□□□□□ -1.84
CIRBP-238	ENST00000592412	KRTAP4-4	Q9BYR3	166 aa		3.4	□□□□□ -1.87
CIRBP-238	ENST00000592412	MUC19	Q7Z5P9	8384 aa		3.4	□□□□□ -1.87
CIRBP-238	ENST00000592412	PRM1	P04553	51 aa		2.94	□□□□□ -1.94
CIRBP-238	ENST00000592412		A0A0A0MQY5	61 aa		2.89	□□□□□ -1.95
CIRBP-238	ENST00000592412	KRTAP21-1	Q3LI58	79 aa		2.89	□□□□□ -1.95
CIRBP-238	ENST00000592412	INE1	O15225	51 aa		2.85	□□□□□ -1.95
CIRBP-238	ENST00000592412	MUC16	Q8WXI7	14507 aa		2.34	□□□□□ -2.03
CIRBP-238	ENST00000592412		H3BS24	57 aa		2.06	□□□□□ -2.08

Retrieved 78 of 20,778 RNA–protein pairs in 298.2 ms