RNA–Protein interactions for RNA: ENST00000592361.2

MBD3-210, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 907 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-210ENST00000592361 HMCN1Q96RW7 5635 aa5.99□□□□□ -1.45
MBD3-210ENST00000592361 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
MBD3-210ENST00000592361 MT4P47944 62 aa5.98□□□□□ -1.45
MBD3-210ENST00000592361 RPS28P62857 69 aaKnown RBP5.98□□□□□ -1.45
MBD3-210ENST00000592361 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
MBD3-210ENST00000592361 KRTAP5-4Q6L8H1 288 aa5.86□□□□□ -1.47
MBD3-210ENST00000592361 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
MBD3-210ENST00000592361 AHNAK2Q8IVF2 5795 aa5.82□□□□□ -1.48
MBD3-210ENST00000592361 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
MBD3-210ENST00000592361 Q1T7F1 81 aa5.81□□□□□ -1.48
MBD3-210ENST00000592361 KRTAP12-3P60328 96 aa5.8□□□□□ -1.48
MBD3-210ENST00000592361 V9GYY9 64 aa5.79□□□□□ -1.48
MBD3-210ENST00000592361 UQCR11O14957 56 aa5.76□□□□□ -1.49
MBD3-210ENST00000592361 PSPHP1O15172 72 aa5.75□□□□□ -1.49
MBD3-210ENST00000592361 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
MBD3-210ENST00000592361 KRTAP5-10Q6L8G5 202 aa5.7□□□□□ -1.5
MBD3-210ENST00000592361 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.5
MBD3-210ENST00000592361 K7ERS5 55 aa5.64□□□□□ -1.51
MBD3-210ENST00000592361 KRTAP4-7Q9BYR0 210 aa5.64□□□□□ -1.51
MBD3-210ENST00000592361 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
MBD3-210ENST00000592361 KRTAP12-4P60329 112 aa5.57□□□□□ -1.52
MBD3-210ENST00000592361 MIR22HGQ0VDD5 57 aa5.57□□□□□ -1.52
MBD3-210ENST00000592361 SPRR5A0A1B0GTR4 108 aa5.56□□□□□ -1.52
MBD3-210ENST00000592361 A6NED7 52 aa5.56□□□□□ -1.52
MBD3-210ENST00000592361 KRTAP20-2Q3LI61 65 aa5.55□□□□□ -1.52
MBD3-210ENST00000592361 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
MBD3-210ENST00000592361 KRTAP5-5Q701N2 237 aaPredicted RBP5.54□□□□□ -1.52
MBD3-210ENST00000592361 KRTAP5-7Q6L8G8 165 aa5.52□□□□□ -1.53
MBD3-210ENST00000592361 CDC42SE1Q9NRR8 79 aa5.44□□□□□ -1.54
MBD3-210ENST00000592361 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
MBD3-210ENST00000592361 BRK1Q8WUW1 75 aa5.41□□□□□ -1.54
MBD3-210ENST00000592361 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
MBD3-210ENST00000592361 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
MBD3-210ENST00000592361 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
MBD3-210ENST00000592361 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
MBD3-210ENST00000592361 PRO0628Q9UI54 55 aa5.21□□□□□ -1.58
MBD3-210ENST00000592361 MT1AP04731 61 aa5.16□□□□□ -1.58
MBD3-210ENST00000592361 KRTAP4-11Q9BYQ6 195 aa5.12□□□□□ -1.59
MBD3-210ENST00000592361 ROMO1P60602 79 aa5.1□□□□□ -1.59
MBD3-210ENST00000592361 KRTAP5-2Q701N4 177 aa5.1□□□□□ -1.59
MBD3-210ENST00000592361 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
MBD3-210ENST00000592361 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
MBD3-210ENST00000592361 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
MBD3-210ENST00000592361 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
MBD3-210ENST00000592361 KRTAP6-2Q3LI66 62 aa4.91□□□□□ -1.62
MBD3-210ENST00000592361 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
MBD3-210ENST00000592361 AHNAKQ09666 5890 aaKnown RBP4.87□□□□□ -1.63
MBD3-210ENST00000592361 KTN1-AS1Q86SY8 53 aa4.86□□□□□ -1.63
MBD3-210ENST00000592361 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
MBD3-210ENST00000592361 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
MBD3-210ENST00000592361 MUC5ACP98088 5654 aa4.84□□□□□ -1.63
MBD3-210ENST00000592361 MUC5BQ9HC84 5762 aaPredicted RBP4.83□□□□□ -1.64
MBD3-210ENST00000592361 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
MBD3-210ENST00000592361 MT3P25713 68 aa4.77□□□□□ -1.65
MBD3-210ENST00000592361 SVIPQ8NHG7 77 aa4.61□□□□□ -1.67
MBD3-210ENST00000592361 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
MBD3-210ENST00000592361 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
MBD3-210ENST00000592361 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
MBD3-210ENST00000592361 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
MBD3-210ENST00000592361 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
MBD3-210ENST00000592361 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
MBD3-210ENST00000592361 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
MBD3-210ENST00000592361 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
MBD3-210ENST00000592361 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
MBD3-210ENST00000592361 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
MBD3-210ENST00000592361 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
MBD3-210ENST00000592361 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
MBD3-210ENST00000592361 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
MBD3-210ENST00000592361 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
MBD3-210ENST00000592361 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
MBD3-210ENST00000592361 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
MBD3-210ENST00000592361 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
MBD3-210ENST00000592361 H3BS24 57 aa3.05□□□□□ -1.92
MBD3-210ENST00000592361 INE1O15225 51 aa3.05□□□□□ -1.92
MBD3-210ENST00000592361 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
MBD3-210ENST00000592361 PRM1P04553 51 aa2.64□□□□□ -1.99
MBD3-210ENST00000592361 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
MBD3-210ENST00000592361 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 13.8 ms