RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 MUC12Q9UKN1 5478 aa7.17□□□□□ -1.26
SPHK1-207ENST00000590959 KRTAP19-7Q3SYF9 63 aa7.14□□□□□ -1.27
SPHK1-207ENST00000590959 KRTAP5-9P26371 169 aa7.13□□□□□ -1.27
SPHK1-207ENST00000590959 SPRR2FQ96RM1 72 aa7.09□□□□□ -1.28
SPHK1-207ENST00000590959 MDN1Q9NU22 5596 aa7.05□□□□□ -1.28
SPHK1-207ENST00000590959 MT1EP04732 61 aa7.02□□□□□ -1.29
SPHK1-207ENST00000590959 LCE3CQ5T5A8 94 aa6.91□□□□□ -1.3
SPHK1-207ENST00000590959 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.3
SPHK1-207ENST00000590959 MT1LQ93083 61 aa6.88□□□□□ -1.31
SPHK1-207ENST00000590959 NEBP20929 6669 aa6.85□□□□□ -1.31
SPHK1-207ENST00000590959 LCE1AQ5T7P2 110 aa6.85□□□□□ -1.31
SPHK1-207ENST00000590959 SPRR2EP22531 72 aa6.83□□□□□ -1.32
SPHK1-207ENST00000590959 SPRR2BP35325 72 aa6.83□□□□□ -1.32
SPHK1-207ENST00000590959 SPRR2AP35326 72 aa6.83□□□□□ -1.32
SPHK1-207ENST00000590959 KRTAP19-3Q7Z4W3 81 aa6.75□□□□□ -1.33
SPHK1-207ENST00000590959 MT1GP13640 62 aa6.7□□□□□ -1.34
SPHK1-207ENST00000590959 LCE5AQ5TCM9 118 aa6.67□□□□□ -1.34
SPHK1-207ENST00000590959 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
SPHK1-207ENST00000590959 MT1MQ8N339 61 aa6.6□□□□□ -1.35
SPHK1-207ENST00000590959 DSTQ03001 7570 aaKnown RBP6.58□□□□□ -1.36
SPHK1-207ENST00000590959 SPRR2DP22532 72 aa6.58□□□□□ -1.36
SPHK1-207ENST00000590959 KRTAP2-3P0C7H8 128 aa6.51□□□□□ -1.37
SPHK1-207ENST00000590959 KRTAP2-4Q9BYR9 128 aa6.51□□□□□ -1.37
SPHK1-207ENST00000590959 KRTAP2-1Q9BYU5 128 aa6.51□□□□□ -1.37
SPHK1-207ENST00000590959 KRTAP9-6A8MVA2 160 aa6.49□□□□□ -1.37
SPHK1-207ENST00000590959 KRTAP4-3Q9BYR4 195 aa6.47□□□□□ -1.37
SPHK1-207ENST00000590959 KRTAP20-1Q3LI63 56 aa6.36□□□□□ -1.39
SPHK1-207ENST00000590959 LCE3BQ5TA77 95 aa6.36□□□□□ -1.39
SPHK1-207ENST00000590959 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
SPHK1-207ENST00000590959 KRTAP2-2Q9BYT5 123 aa6.19□□□□□ -1.42
SPHK1-207ENST00000590959 KRTAP5-5Q701N2 237 aaPredicted RBP5.96□□□□□ -1.46
SPHK1-207ENST00000590959 KRTAP5-4Q6L8H1 288 aa5.86□□□□□ -1.47
SPHK1-207ENST00000590959 MT1AP04731 61 aa5.85□□□□□ -1.47
SPHK1-207ENST00000590959 KRTAP4-9Q9BYQ8 210 aa5.83□□□□□ -1.48
SPHK1-207ENST00000590959 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
SPHK1-207ENST00000590959 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
SPHK1-207ENST00000590959 MT4P47944 62 aa5.76□□□□□ -1.49
SPHK1-207ENST00000590959 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
SPHK1-207ENST00000590959 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
SPHK1-207ENST00000590959 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
SPHK1-207ENST00000590959 KRTAP12-4P60329 112 aa5.68□□□□□ -1.5
SPHK1-207ENST00000590959 HMCN1Q96RW7 5635 aa5.67□□□□□ -1.5
SPHK1-207ENST00000590959 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
SPHK1-207ENST00000590959 KRTAP20-2Q3LI61 65 aa5.51□□□□□ -1.53
SPHK1-207ENST00000590959 LCE3DQ9BYE3 92 aa5.34□□□□□ -1.55
SPHK1-207ENST00000590959 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
SPHK1-207ENST00000590959 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
SPHK1-207ENST00000590959 LCE3EQ5T5B0 92 aa5.32□□□□□ -1.56
SPHK1-207ENST00000590959 MT3P25713 68 aa5.31□□□□□ -1.56
SPHK1-207ENST00000590959 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
SPHK1-207ENST00000590959 AHNAK2Q8IVF2 5795 aa5.2□□□□□ -1.58
SPHK1-207ENST00000590959 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
SPHK1-207ENST00000590959 PRM1P04553 51 aa5.02□□□□□ -1.61
SPHK1-207ENST00000590959 GPR98Q8WXG9 6306 aa5□□□□□ -1.61
SPHK1-207ENST00000590959 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
SPHK1-207ENST00000590959 KRTAP4-11Q9BYQ6 195 aa4.88□□□□□ -1.63
SPHK1-207ENST00000590959 KRTAP5-8O75690 187 aa4.72□□□□□ -1.65
SPHK1-207ENST00000590959 KRTAP5-7Q6L8G8 165 aa4.66□□□□□ -1.66
SPHK1-207ENST00000590959 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
SPHK1-207ENST00000590959 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
SPHK1-207ENST00000590959 MUC5ACP98088 5654 aa4.46□□□□□ -1.7
SPHK1-207ENST00000590959 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
SPHK1-207ENST00000590959 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
SPHK1-207ENST00000590959 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
SPHK1-207ENST00000590959 LCE1CQ5T751 118 aa4.29□□□□□ -1.72
SPHK1-207ENST00000590959 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.74
SPHK1-207ENST00000590959 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
SPHK1-207ENST00000590959 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
SPHK1-207ENST00000590959 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
SPHK1-207ENST00000590959 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
SPHK1-207ENST00000590959 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
SPHK1-207ENST00000590959 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
SPHK1-207ENST00000590959 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
SPHK1-207ENST00000590959 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
SPHK1-207ENST00000590959 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
SPHK1-207ENST00000590959 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
SPHK1-207ENST00000590959 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 121.8 ms