RNA–Protein interactions for RNA: ENST00000590834.5

RUNDC3A-205, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 2,373 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-205ENST00000590834 KRTAP4-7Q9BYR0 210 aa7.76□□□□□ -1.17
RUNDC3A-205ENST00000590834 KRTAP19-4Q3LI73 84 aa7.75□□□□□ -1.17
RUNDC3A-205ENST00000590834 MUC12Q9UKN1 5478 aa7.75□□□□□ -1.17
RUNDC3A-205ENST00000590834 SPRR2FQ96RM1 72 aa7.65□□□□□ -1.18
RUNDC3A-205ENST00000590834 KRTAP19-3Q7Z4W3 81 aa7.62□□□□□ -1.19
RUNDC3A-205ENST00000590834 SYNE2Q8WXH0 6885 aaKnown RBP7.61□□□□□ -1.19
RUNDC3A-205ENST00000590834 KRTAP9-6A8MVA2 160 aa7.6□□□□□ -1.19
RUNDC3A-205ENST00000590834 MT1GP13640 62 aa7.55□□□□□ -1.2
RUNDC3A-205ENST00000590834 MT1MQ8N339 61 aa7.51□□□□□ -1.21
RUNDC3A-205ENST00000590834 LCE5AQ5TCM9 118 aa7.46□□□□□ -1.21
RUNDC3A-205ENST00000590834 KRTAP4-3Q9BYR4 195 aa7.46□□□□□ -1.21
RUNDC3A-205ENST00000590834 KRTAP5-9P26371 169 aa7.45□□□□□ -1.22
RUNDC3A-205ENST00000590834 KRTAP9-6A0A140TA67 174 aa7.44□□□□□ -1.22
RUNDC3A-205ENST00000590834 MDN1Q9NU22 5596 aa7.37□□□□□ -1.23
RUNDC3A-205ENST00000590834 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.28□□□□□ -1.24
RUNDC3A-205ENST00000590834 LCE1AQ5T7P2 110 aa7.28□□□□□ -1.24
RUNDC3A-205ENST00000590834 LOC100996750A0A140TA64 210 aa7.27□□□□□ -1.25
RUNDC3A-205ENST00000590834 DSTQ03001 7570 aaKnown RBP7.18□□□□□ -1.26
RUNDC3A-205ENST00000590834 SPRR2EP22531 72 aa7.17□□□□□ -1.26
RUNDC3A-205ENST00000590834 SPRR2BP35325 72 aa7.17□□□□□ -1.26
RUNDC3A-205ENST00000590834 SPRR2AP35326 72 aa7.17□□□□□ -1.26
RUNDC3A-205ENST00000590834 KRTAP6-3Q3LI67 103 aa7.16□□□□□ -1.26
RUNDC3A-205ENST00000590834 KRTAP2-3P0C7H8 128 aa7.15□□□□□ -1.26
RUNDC3A-205ENST00000590834 KRTAP2-4Q9BYR9 128 aa7.15□□□□□ -1.26
RUNDC3A-205ENST00000590834 KRTAP2-1Q9BYU5 128 aa7.15□□□□□ -1.26
RUNDC3A-205ENST00000590834 SPRR2DP22532 72 aa6.89□□□□□ -1.31
RUNDC3A-205ENST00000590834 KRTAP9-7A8MTY7 169 aa6.76□□□□□ -1.33
RUNDC3A-205ENST00000590834 KRTAP5-5Q701N2 237 aaPredicted RBP6.76□□□□□ -1.33
RUNDC3A-205ENST00000590834 NEBP20929 6669 aa6.72□□□□□ -1.33
RUNDC3A-205ENST00000590834 KRTAP6-1Q3LI64 71 aa6.67□□□□□ -1.34
RUNDC3A-205ENST00000590834 MT1AP04731 61 aa6.66□□□□□ -1.34
RUNDC3A-205ENST00000590834 LCE3BQ5TA77 95 aa6.6□□□□□ -1.35
RUNDC3A-205ENST00000590834 SYNE1Q8NF91 8797 aaKnown RBP6.49□□□□□ -1.37
RUNDC3A-205ENST00000590834 KRTAP12-4P60329 112 aa6.34□□□□□ -1.39
RUNDC3A-205ENST00000590834 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
RUNDC3A-205ENST00000590834 KRTAP5-4Q6L8H1 288 aa6.3□□□□□ -1.4
RUNDC3A-205ENST00000590834 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
RUNDC3A-205ENST00000590834 KRTAP2-2Q9BYT5 123 aa6.09□□□□□ -1.43
RUNDC3A-205ENST00000590834 KRTAP6-2Q3LI66 62 aa6.08□□□□□ -1.44
RUNDC3A-205ENST00000590834 LCE4AQ5TA78 99 aa6.06□□□□□ -1.44
RUNDC3A-205ENST00000590834 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
RUNDC3A-205ENST00000590834 MT4P47944 62 aa6.02□□□□□ -1.45
RUNDC3A-205ENST00000590834 MT3P25713 68 aa6.01□□□□□ -1.45
RUNDC3A-205ENST00000590834 KRTAP20-1Q3LI63 56 aa6□□□□□ -1.45
RUNDC3A-205ENST00000590834 LCE3DQ9BYE3 92 aa5.99□□□□□ -1.45
RUNDC3A-205ENST00000590834 KRTAP20-2Q3LI61 65 aa5.89□□□□□ -1.47
RUNDC3A-205ENST00000590834 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
RUNDC3A-205ENST00000590834 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
RUNDC3A-205ENST00000590834 LCE3EQ5T5B0 92 aa5.85□□□□□ -1.47
RUNDC3A-205ENST00000590834 KRTAP5-2Q701N4 177 aa5.76□□□□□ -1.49
RUNDC3A-205ENST00000590834 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
RUNDC3A-205ENST00000590834 PRM1P04553 51 aa5.67□□□□□ -1.5
RUNDC3A-205ENST00000590834 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
RUNDC3A-205ENST00000590834 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
RUNDC3A-205ENST00000590834 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
RUNDC3A-205ENST00000590834 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
RUNDC3A-205ENST00000590834 MUC5ACP98088 5654 aa4.98□□□□□ -1.61
RUNDC3A-205ENST00000590834 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
RUNDC3A-205ENST00000590834 LCE1BQ5T7P3 118 aa4.89□□□□□ -1.63
RUNDC3A-205ENST00000590834 KRTAP5-10Q6L8G5 202 aa4.89□□□□□ -1.63
RUNDC3A-205ENST00000590834 KRTAP5-8O75690 187 aa4.85□□□□□ -1.63
RUNDC3A-205ENST00000590834 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
RUNDC3A-205ENST00000590834 LCE1CQ5T751 118 aa4.81□□□□□ -1.64
RUNDC3A-205ENST00000590834 KRTAP5-7Q6L8G8 165 aa4.71□□□□□ -1.65
RUNDC3A-205ENST00000590834 GPR98Q8WXG9 6306 aa4.64□□□□□ -1.67
RUNDC3A-205ENST00000590834 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.52□□□□□ -1.69
RUNDC3A-205ENST00000590834 KRTAP21-2Q3LI59 83 aa4.35□□□□□ -1.71
RUNDC3A-205ENST00000590834 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
RUNDC3A-205ENST00000590834 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
RUNDC3A-205ENST00000590834 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.73
RUNDC3A-205ENST00000590834 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
RUNDC3A-205ENST00000590834 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
RUNDC3A-205ENST00000590834 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
RUNDC3A-205ENST00000590834 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
RUNDC3A-205ENST00000590834 MUC19Q7Z5P9 8384 aa3.63□□□□□ -1.83
RUNDC3A-205ENST00000590834 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
RUNDC3A-205ENST00000590834 KRTAP21-1Q3LI58 79 aa3.61□□□□□ -1.83
RUNDC3A-205ENST00000590834 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 426.7 ms