RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 PP632Q6XCG6 107 aa7.88□□□□□ -1.15
MBD3-208ENST00000590830 Q1T7F1 81 aa7.87□□□□□ -1.15
MBD3-208ENST00000590830 V9GYY9 64 aa7.85□□□□□ -1.15
MBD3-208ENST00000590830 KRTAP4-3Q9BYR4 195 aa7.78□□□□□ -1.16
MBD3-208ENST00000590830 KRTAP12-3P60328 96 aa7.76□□□□□ -1.17
MBD3-208ENST00000590830 KRTAP4-9Q9BYQ8 210 aa7.74□□□□□ -1.17
MBD3-208ENST00000590830 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
MBD3-208ENST00000590830 K7ERS5 55 aa7.69□□□□□ -1.18
MBD3-208ENST00000590830 KRTAP4-7Q9BYR0 210 aa7.64□□□□□ -1.19
MBD3-208ENST00000590830 A6NED7 52 aa7.57□□□□□ -1.2
MBD3-208ENST00000590830 RPS28P62857 69 aaKnown RBP7.55□□□□□ -1.2
MBD3-208ENST00000590830 LCE1DQ5T752 114 aa7.55□□□□□ -1.2
MBD3-208ENST00000590830 LCE4AQ5TA78 99 aa7.55□□□□□ -1.2
MBD3-208ENST00000590830 GPR98Q8WXG9 6306 aa7.55□□□□□ -1.2
MBD3-208ENST00000590830 PCP4P48539 62 aa7.53□□□□□ -1.2
MBD3-208ENST00000590830 MT4P47944 62 aa7.48□□□□□ -1.21
MBD3-208ENST00000590830 KRTAP5-4Q6L8H1 288 aa7.48□□□□□ -1.21
MBD3-208ENST00000590830 HMCN1Q96RW7 5635 aa7.46□□□□□ -1.22
MBD3-208ENST00000590830 KRTAP23-1A1A580 65 aa7.43□□□□□ -1.22
MBD3-208ENST00000590830 CDC42SE1Q9NRR8 79 aa7.34□□□□□ -1.23
MBD3-208ENST00000590830 KRTAP4-6Q9BYQ5 205 aa7.33□□□□□ -1.24
MBD3-208ENST00000590830 KRTAP15-1Q3LI76 137 aa7.29□□□□□ -1.24
MBD3-208ENST00000590830 ROMO1P60602 79 aa7.27□□□□□ -1.25
MBD3-208ENST00000590830 KRTAP19-4Q3LI73 84 aa7.26□□□□□ -1.25
MBD3-208ENST00000590830 KRTAP5-5Q701N2 237 aaPredicted RBP7.26□□□□□ -1.25
MBD3-208ENST00000590830 LOC100996750A0A140TA64 210 aa7.23□□□□□ -1.25
MBD3-208ENST00000590830 LCE3CQ5T5A8 94 aa7.17□□□□□ -1.26
MBD3-208ENST00000590830 AHNAK2Q8IVF2 5795 aa7.14□□□□□ -1.27
MBD3-208ENST00000590830 KRTAP20-2Q3LI61 65 aa7.04□□□□□ -1.28
MBD3-208ENST00000590830 SPRR5A0A1B0GTR4 108 aa7□□□□□ -1.29
MBD3-208ENST00000590830 KRTAP12-4P60329 112 aa6.97□□□□□ -1.29
MBD3-208ENST00000590830 SYNE1Q8NF91 8797 aaKnown RBP6.97□□□□□ -1.29
MBD3-208ENST00000590830 KRTAP5-10Q6L8G5 202 aa6.95□□□□□ -1.3
MBD3-208ENST00000590830 KRTAP5-3Q6L8H2 238 aa6.86□□□□□ -1.31
MBD3-208ENST00000590830 KRTAP9-6A8MVA2 160 aa6.83□□□□□ -1.32
MBD3-208ENST00000590830 MT1AP04731 61 aa6.77□□□□□ -1.33
MBD3-208ENST00000590830 KRTAP6-1Q3LI64 71 aa6.75□□□□□ -1.33
MBD3-208ENST00000590830 KRTAP5-7Q6L8G8 165 aa6.67□□□□□ -1.34
MBD3-208ENST00000590830 BRK1Q8WUW1 75 aa6.6□□□□□ -1.35
MBD3-208ENST00000590830 KRTAP5-2Q701N4 177 aa6.58□□□□□ -1.36
MBD3-208ENST00000590830 KRTAP9-4Q9BYQ2 154 aa6.55□□□□□ -1.36
MBD3-208ENST00000590830 KRTAP6-2Q3LI66 62 aa6.42□□□□□ -1.38
MBD3-208ENST00000590830 KRTAP4-11Q9BYQ6 195 aa6.39□□□□□ -1.39
MBD3-208ENST00000590830 KRTAP5-8O75690 187 aa6.2□□□□□ -1.42
MBD3-208ENST00000590830 PMAIP1Q13794 54 aa6.2□□□□□ -1.42
MBD3-208ENST00000590830 MT3P25713 68 aa6.17□□□□□ -1.42
MBD3-208ENST00000590830 OBSCNQ5VST9 7968 aa6.11□□□□□ -1.43
MBD3-208ENST00000590830 PRAC1Q96KF2 57 aa6.03□□□□□ -1.44
MBD3-208ENST00000590830 KRTAP5-1Q6L8H4 278 aa5.88□□□□□ -1.47
MBD3-208ENST00000590830 MUC5BQ9HC84 5762 aaPredicted RBP5.87□□□□□ -1.47
MBD3-208ENST00000590830 AHNAKQ09666 5890 aaKnown RBP5.84□□□□□ -1.47
MBD3-208ENST00000590830 MUC5ACP98088 5654 aa5.82□□□□□ -1.48
MBD3-208ENST00000590830 KRTAP9-9Q9BYP9 154 aa5.79□□□□□ -1.48
MBD3-208ENST00000590830 PRO0628Q9UI54 55 aa5.78□□□□□ -1.48
MBD3-208ENST00000590830 SVIPQ8NHG7 77 aa5.65□□□□□ -1.5
MBD3-208ENST00000590830 LCE1EQ5T753 118 aa5.64□□□□□ -1.51
MBD3-208ENST00000590830 KTN1-AS1Q86SY8 53 aa5.51□□□□□ -1.53
MBD3-208ENST00000590830 KRTAP4-2Q9BYR5 136 aa5.36□□□□□ -1.55
MBD3-208ENST00000590830 LCE1BQ5T7P3 118 aa5.31□□□□□ -1.56
MBD3-208ENST00000590830 LCE1CQ5T751 118 aa5.24□□□□□ -1.57
MBD3-208ENST00000590830 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
MBD3-208ENST00000590830 LUZP6Q538Z0 58 aa4.96□□□□□ -1.62
MBD3-208ENST00000590830 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
MBD3-208ENST00000590830 KRTAP4-12Q9BQ66 201 aa4.83□□□□□ -1.64
MBD3-208ENST00000590830 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.79□□□□□ -1.64
MBD3-208ENST00000590830 KRTAP5-11Q6L8G4 156 aa4.73□□□□□ -1.65
MBD3-208ENST00000590830 LCE1FQ5T754 118 aa4.56□□□□□ -1.68
MBD3-208ENST00000590830 KRTAP21-2Q3LI59 83 aa4.46□□□□□ -1.7
MBD3-208ENST00000590830 PHGR1C9JFL3 82 aa4.1□□□□□ -1.75
MBD3-208ENST00000590830 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
MBD3-208ENST00000590830 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
MBD3-208ENST00000590830 H3BS24 57 aa4□□□□□ -1.77
MBD3-208ENST00000590830 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
MBD3-208ENST00000590830 PRM1P04553 51 aa3.74□□□□□ -1.81
MBD3-208ENST00000590830 A0A0A0MQY5 61 aa3.53□□□□□ -1.84
MBD3-208ENST00000590830 INE1O15225 51 aa3.38□□□□□ -1.87
MBD3-208ENST00000590830 KRTAP21-1Q3LI58 79 aa3.06□□□□□ -1.92
MBD3-208ENST00000590830 MUC16Q8WXI7 14507 aa2.68□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 63.9 ms