RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 A0A1B0GU69 56 aa7.49□□□□□ -1.21
DDX39A-215ENST00000590696 H7BZZ5 65 aa7.47□□□□□ -1.21
DDX39A-215ENST00000590696 KRTAP5-10Q6L8G5 202 aa7.46□□□□□ -1.22
DDX39A-215ENST00000590696 KRTAP4-7Q9BYR0 210 aa7.35□□□□□ -1.23
DDX39A-215ENST00000590696 KRTAP12-3P60328 96 aa7.27□□□□□ -1.25
DDX39A-215ENST00000590696 KRTAP5-3Q6L8H2 238 aa7.22□□□□□ -1.25
DDX39A-215ENST00000590696 KRTAP5-7Q6L8G8 165 aa7.21□□□□□ -1.26
DDX39A-215ENST00000590696 KRTAP20-2Q3LI61 65 aa7.18□□□□□ -1.26
DDX39A-215ENST00000590696 PRR15LQ9BU68 103 aa7.15□□□□□ -1.26
DDX39A-215ENST00000590696 KRTAP5-5Q701N2 237 aaPredicted RBP7.14□□□□□ -1.27
DDX39A-215ENST00000590696 SPRR5A0A1B0GTR4 108 aa7.1□□□□□ -1.27
DDX39A-215ENST00000590696 KRTAP12-4P60329 112 aa7.04□□□□□ -1.28
DDX39A-215ENST00000590696 ANAPC13Q9BS18 74 aa7.04□□□□□ -1.28
DDX39A-215ENST00000590696 LINC01558Q9Y6Z2 57 aa7.01□□□□□ -1.29
DDX39A-215ENST00000590696 LOC100996750A0A140TA64 210 aa6.98□□□□□ -1.29
DDX39A-215ENST00000590696 CCDC179H3BU77 68 aa6.93□□□□□ -1.3
DDX39A-215ENST00000590696 ATP5EP56381 51 aaPredicted RBP6.93□□□□□ -1.3
DDX39A-215ENST00000590696 UQCR11O14957 56 aa6.92□□□□□ -1.3
DDX39A-215ENST00000590696 KRTAP25-1Q3LHN0 102 aa6.9□□□□□ -1.3
DDX39A-215ENST00000590696 SYNE1Q8NF91 8797 aaKnown RBP6.9□□□□□ -1.31
DDX39A-215ENST00000590696 KRTAP19-4Q3LI73 84 aa6.81□□□□□ -1.32
DDX39A-215ENST00000590696 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
DDX39A-215ENST00000590696 KRTAP15-1Q3LI76 137 aa6.68□□□□□ -1.34
DDX39A-215ENST00000590696 K7ERS5 55 aa6.66□□□□□ -1.34
DDX39A-215ENST00000590696 LCE3CQ5T5A8 94 aa6.66□□□□□ -1.34
DDX39A-215ENST00000590696 KRTAP4-11Q9BYQ6 195 aa6.63□□□□□ -1.35
DDX39A-215ENST00000590696 TMEM258P61165 79 aa6.62□□□□□ -1.35
DDX39A-215ENST00000590696 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
DDX39A-215ENST00000590696 KRTAP5-2Q701N4 177 aa6.58□□□□□ -1.36
DDX39A-215ENST00000590696 MT1AP04731 61 aa6.56□□□□□ -1.36
DDX39A-215ENST00000590696 KRTAP6-1Q3LI64 71 aa6.55□□□□□ -1.36
DDX39A-215ENST00000590696 PSPHP1O15172 72 aa6.42□□□□□ -1.38
DDX39A-215ENST00000590696 KRTAP5-8O75690 187 aa6.41□□□□□ -1.38
DDX39A-215ENST00000590696 KRTAP9-4Q9BYQ2 154 aa6.38□□□□□ -1.39
DDX39A-215ENST00000590696 V9GYY9 64 aa6.35□□□□□ -1.39
DDX39A-215ENST00000590696 KRTAP6-2Q3LI66 62 aa6.32□□□□□ -1.4
DDX39A-215ENST00000590696 KRTAP9-6A8MVA2 160 aa6.3□□□□□ -1.4
DDX39A-215ENST00000590696 Q1T7F1 81 aa6.29□□□□□ -1.4
DDX39A-215ENST00000590696 MUC5BQ9HC84 5762 aaPredicted RBP6.27□□□□□ -1.41
DDX39A-215ENST00000590696 AHNAKQ09666 5890 aaKnown RBP6.26□□□□□ -1.41
DDX39A-215ENST00000590696 CDC42SE1Q9NRR8 79 aa6.26□□□□□ -1.41
DDX39A-215ENST00000590696 MUC5ACP98088 5654 aa6.25□□□□□ -1.41
DDX39A-215ENST00000590696 OBSCNQ5VST9 7968 aa6.22□□□□□ -1.41
DDX39A-215ENST00000590696 RPS28P62857 69 aaKnown RBP6.22□□□□□ -1.41
DDX39A-215ENST00000590696 A6NED7 52 aa6.17□□□□□ -1.42
DDX39A-215ENST00000590696 ROMO1P60602 79 aa6.15□□□□□ -1.42
DDX39A-215ENST00000590696 KRTAP9-9Q9BYP9 154 aa6.14□□□□□ -1.43
DDX39A-215ENST00000590696 MT3P25713 68 aa6.02□□□□□ -1.45
DDX39A-215ENST00000590696 KRTAP5-1Q6L8H4 278 aa5.96□□□□□ -1.46
DDX39A-215ENST00000590696 LCE1EQ5T753 118 aa5.59□□□□□ -1.51
DDX39A-215ENST00000590696 LCE1BQ5T7P3 118 aa5.32□□□□□ -1.56
DDX39A-215ENST00000590696 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
DDX39A-215ENST00000590696 PCP4P48539 62 aa5.27□□□□□ -1.57
DDX39A-215ENST00000590696 LCE1CQ5T751 118 aa5.19□□□□□ -1.58
DDX39A-215ENST00000590696 KRTAP4-12Q9BQ66 201 aa4.96□□□□□ -1.62
DDX39A-215ENST00000590696 BRK1Q8WUW1 75 aa4.87□□□□□ -1.63
DDX39A-215ENST00000590696 SVIPQ8NHG7 77 aa4.78□□□□□ -1.64
DDX39A-215ENST00000590696 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
DDX39A-215ENST00000590696 H3BS24 57 aa4.73□□□□□ -1.65
DDX39A-215ENST00000590696 KRTAP5-11Q6L8G4 156 aa4.72□□□□□ -1.65
DDX39A-215ENST00000590696 LCE1FQ5T754 118 aa4.67□□□□□ -1.66
DDX39A-215ENST00000590696 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
DDX39A-215ENST00000590696 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
DDX39A-215ENST00000590696 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
DDX39A-215ENST00000590696 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
DDX39A-215ENST00000590696 PHGR1C9JFL3 82 aa4.37□□□□□ -1.71
DDX39A-215ENST00000590696 KRTAP21-2Q3LI59 83 aa4.31□□□□□ -1.72
DDX39A-215ENST00000590696 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
DDX39A-215ENST00000590696 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
DDX39A-215ENST00000590696 KTN1-AS1Q86SY8 53 aa3.97□□□□□ -1.77
DDX39A-215ENST00000590696 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
DDX39A-215ENST00000590696 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
DDX39A-215ENST00000590696 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
DDX39A-215ENST00000590696 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
DDX39A-215ENST00000590696 PRM1P04553 51 aa3.13□□□□□ -1.91
DDX39A-215ENST00000590696 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
DDX39A-215ENST00000590696 MUC16Q8WXI7 14507 aa2.71□□□□□ -1.98
DDX39A-215ENST00000590696 INE1O15225 51 aa2.57□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms