RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 H3BS24 57 aa6.67□□□□□ -1.34
CTDP1-205ENST00000590599 KRTAP20-1Q3LI63 56 aa6.65□□□□□ -1.34
CTDP1-205ENST00000590599 SPRR2EP22531 72 aa6.64□□□□□ -1.35
CTDP1-205ENST00000590599 SPRR2BP35325 72 aa6.64□□□□□ -1.35
CTDP1-205ENST00000590599 SPRR2AP35326 72 aa6.64□□□□□ -1.35
CTDP1-205ENST00000590599 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
CTDP1-205ENST00000590599 MT1EP04732 61 aa6.58□□□□□ -1.36
CTDP1-205ENST00000590599 LCE1AQ5T7P2 110 aa6.57□□□□□ -1.36
CTDP1-205ENST00000590599 KRTAP2-3P0C7H8 128 aa6.46□□□□□ -1.37
CTDP1-205ENST00000590599 KRTAP2-4Q9BYR9 128 aa6.46□□□□□ -1.37
CTDP1-205ENST00000590599 MT1LQ93083 61 aa6.44□□□□□ -1.38
CTDP1-205ENST00000590599 SPRR2DP22532 72 aa6.39□□□□□ -1.39
CTDP1-205ENST00000590599 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
CTDP1-205ENST00000590599 KRTAP19-3Q7Z4W3 81 aa6.34□□□□□ -1.39
CTDP1-205ENST00000590599 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.4
CTDP1-205ENST00000590599 MT1GP13640 62 aa6.28□□□□□ -1.4
CTDP1-205ENST00000590599 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
CTDP1-205ENST00000590599 KRTAP2-2Q9BYT5 123 aa6.26□□□□□ -1.41
CTDP1-205ENST00000590599 KRTAP2-1Q9BYU5 128 aa6.26□□□□□ -1.41
CTDP1-205ENST00000590599 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
CTDP1-205ENST00000590599 LCE5AQ5TCM9 118 aa6.22□□□□□ -1.41
CTDP1-205ENST00000590599 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
CTDP1-205ENST00000590599 MT1MQ8N339 61 aa6.21□□□□□ -1.42
CTDP1-205ENST00000590599 NDUFAF8A1L188 74 aa6.18□□□□□ -1.42
CTDP1-205ENST00000590599 DSTQ03001 7570 aaKnown RBP6.13□□□□□ -1.43
CTDP1-205ENST00000590599 LUZP6Q538Z0 58 aa6.09□□□□□ -1.43
CTDP1-205ENST00000590599 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
CTDP1-205ENST00000590599 KRTAP9-6A8MVA2 160 aa5.97□□□□□ -1.45
CTDP1-205ENST00000590599 KRTAP4-9Q9BYQ8 210 aa5.88□□□□□ -1.47
CTDP1-205ENST00000590599 LOC100996750A0A140TA64 210 aa5.85□□□□□ -1.47
CTDP1-205ENST00000590599 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
CTDP1-205ENST00000590599 MT4P47944 62 aa5.66□□□□□ -1.5
CTDP1-205ENST00000590599 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
CTDP1-205ENST00000590599 KRTAP4-6Q9BYQ5 205 aa5.63□□□□□ -1.51
CTDP1-205ENST00000590599 HMCN1Q96RW7 5635 aa5.61□□□□□ -1.51
CTDP1-205ENST00000590599 LCE4AQ5TA78 99 aa5.58□□□□□ -1.52
CTDP1-205ENST00000590599 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
CTDP1-205ENST00000590599 KRTAP5-4Q6L8H1 288 aa5.55□□□□□ -1.52
CTDP1-205ENST00000590599 GPR98Q8WXG9 6306 aa5.54□□□□□ -1.52
CTDP1-205ENST00000590599 MT1AP04731 61 aa5.48□□□□□ -1.53
CTDP1-205ENST00000590599 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
CTDP1-205ENST00000590599 AHNAK2Q8IVF2 5795 aa5.39□□□□□ -1.55
CTDP1-205ENST00000590599 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
CTDP1-205ENST00000590599 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
CTDP1-205ENST00000590599 KRTAP5-10Q6L8G5 202 aa5.22□□□□□ -1.57
CTDP1-205ENST00000590599 SYNE1Q8NF91 8797 aaKnown RBP5.22□□□□□ -1.57
CTDP1-205ENST00000590599 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
CTDP1-205ENST00000590599 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
CTDP1-205ENST00000590599 INE1O15225 51 aa5.1□□□□□ -1.59
CTDP1-205ENST00000590599 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
CTDP1-205ENST00000590599 MT3P25713 68 aa4.97□□□□□ -1.61
CTDP1-205ENST00000590599 KRTAP5-7Q6L8G8 165 aa4.96□□□□□ -1.61
CTDP1-205ENST00000590599 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
CTDP1-205ENST00000590599 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
CTDP1-205ENST00000590599 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
CTDP1-205ENST00000590599 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
CTDP1-205ENST00000590599 KRTAP5-8O75690 187 aa4.64□□□□□ -1.67
CTDP1-205ENST00000590599 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
CTDP1-205ENST00000590599 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
CTDP1-205ENST00000590599 MUC5BQ9HC84 5762 aaPredicted RBP4.4□□□□□ -1.7
CTDP1-205ENST00000590599 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
CTDP1-205ENST00000590599 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
CTDP1-205ENST00000590599 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
CTDP1-205ENST00000590599 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
CTDP1-205ENST00000590599 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
CTDP1-205ENST00000590599 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
CTDP1-205ENST00000590599 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
CTDP1-205ENST00000590599 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
CTDP1-205ENST00000590599 PRM1P04553 51 aa4.01□□□□□ -1.77
CTDP1-205ENST00000590599 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
CTDP1-205ENST00000590599 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
CTDP1-205ENST00000590599 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
CTDP1-205ENST00000590599 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
CTDP1-205ENST00000590599 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
CTDP1-205ENST00000590599 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
CTDP1-205ENST00000590599 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
CTDP1-205ENST00000590599 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
CTDP1-205ENST00000590599 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 45.2 ms