RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
LSM12-203ENST00000590563 COX7CP15954 63 aa4.44□□□□□ -1.7
LSM12-203ENST00000590563 A0A0D9SG42 100 aa4.43□□□□□ -1.7
LSM12-203ENST00000590563 SNURFQ9Y675 71 aa4.41□□□□□ -1.7
LSM12-203ENST00000590563 DMAC1Q96GE9 116 aa4.4□□□□□ -1.71
LSM12-203ENST00000590563 CAMK2N1Q7Z7J9 78 aa4.36□□□□□ -1.71
LSM12-203ENST00000590563 SPANXA2-OT1Q8N9U9 137 aa4.36□□□□□ -1.71
LSM12-203ENST00000590563 H7BZZ5 65 aa4.35□□□□□ -1.71
LSM12-203ENST00000590563 ANAPC13Q9BS18 74 aa4.35□□□□□ -1.71
LSM12-203ENST00000590563 CCDC179H3BU77 68 aa4.33□□□□□ -1.72
LSM12-203ENST00000590563 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
LSM12-203ENST00000590563 ACYP2P14621 99 aa4.25□□□□□ -1.73
LSM12-203ENST00000590563 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
LSM12-203ENST00000590563 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
LSM12-203ENST00000590563 COA5Q86WW8 74 aa4.19□□□□□ -1.74
LSM12-203ENST00000590563 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
LSM12-203ENST00000590563 ATP5EP56381 51 aaPredicted RBP4.15□□□□□ -1.75
LSM12-203ENST00000590563 TMEM258P61165 79 aa4.15□□□□□ -1.75
LSM12-203ENST00000590563 PCP4P48539 62 aa4.11□□□□□ -1.75
LSM12-203ENST00000590563 CHKB-CPT1BH3BT56 60 aa4.1□□□□□ -1.75
LSM12-203ENST00000590563 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
LSM12-203ENST00000590563 SPTSSBQ8NFR3 76 aa4.09□□□□□ -1.75
LSM12-203ENST00000590563 SERP1Q9Y6X1 66 aa4.02□□□□□ -1.77
LSM12-203ENST00000590563 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
LSM12-203ENST00000590563 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
LSM12-203ENST00000590563 LINC01558Q9Y6Z2 57 aa3.97□□□□□ -1.77
LSM12-203ENST00000590563 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
LSM12-203ENST00000590563 RPS28P62857 69 aaKnown RBP3.94□□□□□ -1.78
LSM12-203ENST00000590563 MT1AP04731 61 aa3.92□□□□□ -1.78
LSM12-203ENST00000590563 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
LSM12-203ENST00000590563 A0A1B0GU69 56 aa3.9□□□□□ -1.79
LSM12-203ENST00000590563 Q1T7F1 81 aa3.9□□□□□ -1.79
LSM12-203ENST00000590563 A0A1B0GU33 70 aa3.89□□□□□ -1.79
LSM12-203ENST00000590563 SPINT4Q6UDR6 99 aa3.89□□□□□ -1.79
LSM12-203ENST00000590563 SEC61GP60059 68 aa3.88□□□□□ -1.79
LSM12-203ENST00000590563 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
LSM12-203ENST00000590563 SMIM26A0A096LP01 95 aa3.86□□□□□ -1.79
LSM12-203ENST00000590563 SPATA8Q6RVD6 105 aa3.86□□□□□ -1.79
LSM12-203ENST00000590563 TNP1P09430 55 aa3.82□□□□□ -1.8
LSM12-203ENST00000590563 V9GYY9 64 aa3.82□□□□□ -1.8
LSM12-203ENST00000590563 PRR15LQ9BU68 103 aa3.81□□□□□ -1.8
LSM12-203ENST00000590563 A8MU10 97 aa3.79□□□□□ -1.8
LSM12-203ENST00000590563 PSPHP1O15172 72 aa3.77□□□□□ -1.81
LSM12-203ENST00000590563 UQCR11O14957 56 aa3.75□□□□□ -1.81
LSM12-203ENST00000590563 MIR22HGQ0VDD5 57 aa3.69□□□□□ -1.82
LSM12-203ENST00000590563 MT3P25713 68 aa3.66□□□□□ -1.82
LSM12-203ENST00000590563 A6NED7 52 aa3.61□□□□□ -1.83
LSM12-203ENST00000590563 CDC42SE1Q9NRR8 79 aa3.59□□□□□ -1.83
LSM12-203ENST00000590563 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
LSM12-203ENST00000590563 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
LSM12-203ENST00000590563 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
LSM12-203ENST00000590563 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
LSM12-203ENST00000590563 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
LSM12-203ENST00000590563 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
LSM12-203ENST00000590563 K7ERS5 55 aa3.47□□□□□ -1.85
LSM12-203ENST00000590563 SVIPQ8NHG7 77 aa3.42□□□□□ -1.86
LSM12-203ENST00000590563 ROMO1P60602 79 aa3.39□□□□□ -1.87
LSM12-203ENST00000590563 BRK1Q8WUW1 75 aa3.39□□□□□ -1.87
LSM12-203ENST00000590563 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
LSM12-203ENST00000590563 A0A0A0MQY5 61 aa3.28□□□□□ -1.88
LSM12-203ENST00000590563 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
LSM12-203ENST00000590563 PRO0628Q9UI54 55 aa3.25□□□□□ -1.89
LSM12-203ENST00000590563 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
LSM12-203ENST00000590563 PMAIP1Q13794 54 aa3.2□□□□□ -1.9
LSM12-203ENST00000590563 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
LSM12-203ENST00000590563 PRAC1Q96KF2 57 aa3.09□□□□□ -1.91
LSM12-203ENST00000590563 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.92
LSM12-203ENST00000590563 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
LSM12-203ENST00000590563 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
LSM12-203ENST00000590563 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
LSM12-203ENST00000590563 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
LSM12-203ENST00000590563 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
LSM12-203ENST00000590563 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
LSM12-203ENST00000590563 LUZP6Q538Z0 58 aa2.42□□□□□ -2.02
LSM12-203ENST00000590563 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
LSM12-203ENST00000590563 INE1O15225 51 aa1.87□□□□□ -2.11
LSM12-203ENST00000590563 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
LSM12-203ENST00000590563 PRM1P04553 51 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 28.7 ms