RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 MDN1Q9NU22 5596 aa6.09□□□□□ -1.43
GCDH-212ENST00000590530 KRTAP6-3Q3LI67 103 aa6.08□□□□□ -1.44
GCDH-212ENST00000590530 MT1LQ93083 61 aa6.04□□□□□ -1.44
GCDH-212ENST00000590530 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.44
GCDH-212ENST00000590530 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
GCDH-212ENST00000590530 LCE3CQ5T5A8 94 aa5.97□□□□□ -1.45
GCDH-212ENST00000590530 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
GCDH-212ENST00000590530 LCE1AQ5T7P2 110 aa5.94□□□□□ -1.46
GCDH-212ENST00000590530 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
GCDH-212ENST00000590530 SPRR2EP22531 72 aa5.9□□□□□ -1.47
GCDH-212ENST00000590530 SPRR2BP35325 72 aa5.9□□□□□ -1.47
GCDH-212ENST00000590530 SPRR2AP35326 72 aa5.9□□□□□ -1.47
GCDH-212ENST00000590530 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
GCDH-212ENST00000590530 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
GCDH-212ENST00000590530 MT1GP13640 62 aa5.85□□□□□ -1.47
GCDH-212ENST00000590530 MT1MQ8N339 61 aa5.83□□□□□ -1.48
GCDH-212ENST00000590530 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
GCDH-212ENST00000590530 NEBP20929 6669 aa5.8□□□□□ -1.48
GCDH-212ENST00000590530 NDUFAF8A1L188 74 aa5.79□□□□□ -1.48
GCDH-212ENST00000590530 DSTQ03001 7570 aaKnown RBP5.74□□□□□ -1.49
GCDH-212ENST00000590530 SPRR2DP22532 72 aa5.67□□□□□ -1.5
GCDH-212ENST00000590530 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
GCDH-212ENST00000590530 LOC100996750A0A140TA64 210 aa5.58□□□□□ -1.52
GCDH-212ENST00000590530 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
GCDH-212ENST00000590530 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
GCDH-212ENST00000590530 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
GCDH-212ENST00000590530 KRTAP20-1Q3LI63 56 aa5.3□□□□□ -1.56
GCDH-212ENST00000590530 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
GCDH-212ENST00000590530 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
GCDH-212ENST00000590530 A0A0A0MQY5 61 aa5.24□□□□□ -1.57
GCDH-212ENST00000590530 KRTAP2-2Q9BYT5 123 aa5.22□□□□□ -1.57
GCDH-212ENST00000590530 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
GCDH-212ENST00000590530 KRTAP6-1Q3LI64 71 aa5.12□□□□□ -1.59
GCDH-212ENST00000590530 MT1AP04731 61 aa5.11□□□□□ -1.59
GCDH-212ENST00000590530 KRTAP5-4Q6L8H1 288 aa5.09□□□□□ -1.59
GCDH-212ENST00000590530 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
GCDH-212ENST00000590530 MT4P47944 62 aa4.98□□□□□ -1.61
GCDH-212ENST00000590530 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
GCDH-212ENST00000590530 KRTAP4-6Q9BYQ5 205 aa4.96□□□□□ -1.62
GCDH-212ENST00000590530 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
GCDH-212ENST00000590530 HMCN1Q96RW7 5635 aa4.9□□□□□ -1.63
GCDH-212ENST00000590530 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
GCDH-212ENST00000590530 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
GCDH-212ENST00000590530 INE1O15225 51 aa4.82□□□□□ -1.64
GCDH-212ENST00000590530 KRTAP20-2Q3LI61 65 aa4.79□□□□□ -1.64
GCDH-212ENST00000590530 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
GCDH-212ENST00000590530 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
GCDH-212ENST00000590530 MT3P25713 68 aa4.62□□□□□ -1.67
GCDH-212ENST00000590530 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.67
GCDH-212ENST00000590530 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
GCDH-212ENST00000590530 LCE3DQ9BYE3 92 aa4.49□□□□□ -1.69
GCDH-212ENST00000590530 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.7
GCDH-212ENST00000590530 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
GCDH-212ENST00000590530 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
GCDH-212ENST00000590530 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
GCDH-212ENST00000590530 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
GCDH-212ENST00000590530 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
GCDH-212ENST00000590530 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
GCDH-212ENST00000590530 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.77
GCDH-212ENST00000590530 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
GCDH-212ENST00000590530 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.77
GCDH-212ENST00000590530 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
GCDH-212ENST00000590530 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
GCDH-212ENST00000590530 PRM1P04553 51 aa3.84□□□□□ -1.79
GCDH-212ENST00000590530 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
GCDH-212ENST00000590530 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
GCDH-212ENST00000590530 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
GCDH-212ENST00000590530 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
GCDH-212ENST00000590530 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
GCDH-212ENST00000590530 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
GCDH-212ENST00000590530 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
GCDH-212ENST00000590530 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
GCDH-212ENST00000590530 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
GCDH-212ENST00000590530 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
GCDH-212ENST00000590530 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
GCDH-212ENST00000590530 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
GCDH-212ENST00000590530 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
GCDH-212ENST00000590530 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 167.5 ms