RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 MT1EP04732 61 aa4.27□□□□□ -1.73
PDE4A-207ENST00000590407 KMT2DO14686 5537 aa4.24□□□□□ -1.73
PDE4A-207ENST00000590407 KRTAP4-7Q9BYR0 210 aa4.2□□□□□ -1.74
PDE4A-207ENST00000590407 SSPOA2VEC9 5147 aa4.19□□□□□ -1.74
PDE4A-207ENST00000590407 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
PDE4A-207ENST00000590407 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.75
PDE4A-207ENST00000590407 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.04□□□□□ -1.76
PDE4A-207ENST00000590407 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
PDE4A-207ENST00000590407 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
PDE4A-207ENST00000590407 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
PDE4A-207ENST00000590407 MT1GP13640 62 aa3.99□□□□□ -1.77
PDE4A-207ENST00000590407 KRTAP19-3Q7Z4W3 81 aa3.98□□□□□ -1.77
PDE4A-207ENST00000590407 MT1MQ8N339 61 aa3.98□□□□□ -1.77
PDE4A-207ENST00000590407 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
PDE4A-207ENST00000590407 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
PDE4A-207ENST00000590407 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
PDE4A-207ENST00000590407 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
PDE4A-207ENST00000590407 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
PDE4A-207ENST00000590407 MT1AP04731 61 aa3.71□□□□□ -1.81
PDE4A-207ENST00000590407 SPRR2FQ96RM1 72 aa3.71□□□□□ -1.81
PDE4A-207ENST00000590407 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
PDE4A-207ENST00000590407 NEBP20929 6669 aa3.69□□□□□ -1.82
PDE4A-207ENST00000590407 MDN1Q9NU22 5596 aa3.68□□□□□ -1.82
PDE4A-207ENST00000590407 LCE3BQ5TA77 95 aa3.63□□□□□ -1.83
PDE4A-207ENST00000590407 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
PDE4A-207ENST00000590407 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
PDE4A-207ENST00000590407 KRTAP5-9P26371 169 aa3.55□□□□□ -1.84
PDE4A-207ENST00000590407 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
PDE4A-207ENST00000590407 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
PDE4A-207ENST00000590407 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
PDE4A-207ENST00000590407 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
PDE4A-207ENST00000590407 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
PDE4A-207ENST00000590407 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
PDE4A-207ENST00000590407 SPRR2EP22531 72 aa3.4□□□□□ -1.86
PDE4A-207ENST00000590407 SPRR2BP35325 72 aa3.4□□□□□ -1.86
PDE4A-207ENST00000590407 SPRR2AP35326 72 aa3.4□□□□□ -1.86
PDE4A-207ENST00000590407 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.87
PDE4A-207ENST00000590407 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
PDE4A-207ENST00000590407 PRM1P04553 51 aa3.33□□□□□ -1.88
PDE4A-207ENST00000590407 SPRR2DP22532 72 aa3.29□□□□□ -1.88
PDE4A-207ENST00000590407 MT3P25713 68 aa3.25□□□□□ -1.89
PDE4A-207ENST00000590407 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
PDE4A-207ENST00000590407 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
PDE4A-207ENST00000590407 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
PDE4A-207ENST00000590407 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
PDE4A-207ENST00000590407 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
PDE4A-207ENST00000590407 LCE1DQ5T752 114 aa2.93□□□□□ -1.94
PDE4A-207ENST00000590407 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
PDE4A-207ENST00000590407 LCE4AQ5TA78 99 aa2.92□□□□□ -1.94
PDE4A-207ENST00000590407 MT4P47944 62 aa2.92□□□□□ -1.94
PDE4A-207ENST00000590407 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
PDE4A-207ENST00000590407 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
PDE4A-207ENST00000590407 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
PDE4A-207ENST00000590407 KRTAP4-6Q9BYQ5 205 aa2.85□□□□□ -1.95
PDE4A-207ENST00000590407 KRTAP5-3Q6L8H2 238 aa2.74□□□□□ -1.97
PDE4A-207ENST00000590407 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
PDE4A-207ENST00000590407 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
PDE4A-207ENST00000590407 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
PDE4A-207ENST00000590407 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
PDE4A-207ENST00000590407 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
PDE4A-207ENST00000590407 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
PDE4A-207ENST00000590407 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
PDE4A-207ENST00000590407 KRTAP4-2Q9BYR5 136 aa2.49□□□□□ -2.01
PDE4A-207ENST00000590407 KRTAP4-11Q9BYQ6 195 aa2.46□□□□□ -2.02
PDE4A-207ENST00000590407 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
PDE4A-207ENST00000590407 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
PDE4A-207ENST00000590407 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
PDE4A-207ENST00000590407 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
PDE4A-207ENST00000590407 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
PDE4A-207ENST00000590407 KRTAP9-9Q9BYP9 154 aa2.26□□□□□ -2.05
PDE4A-207ENST00000590407 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
PDE4A-207ENST00000590407 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
PDE4A-207ENST00000590407 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
PDE4A-207ENST00000590407 KRTAP4-12Q9BQ66 201 aa1.87□□□□□ -2.11
PDE4A-207ENST00000590407 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
PDE4A-207ENST00000590407 LCE1FQ5T754 118 aa1.8□□□□□ -2.12
PDE4A-207ENST00000590407 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
PDE4A-207ENST00000590407 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms