RNA–Protein interactions for RNA: ENST00000590371.5

LDLRAD4-215, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-215ENST00000590371 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
LDLRAD4-215ENST00000590371 MT1GP13640 62 aa6.61□□□□□ -1.35
LDLRAD4-215ENST00000590371 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
LDLRAD4-215ENST00000590371 A6NED7 52 aa6.59□□□□□ -1.35
LDLRAD4-215ENST00000590371 DSTQ03001 7570 aaKnown RBP6.58□□□□□ -1.36
LDLRAD4-215ENST00000590371 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
LDLRAD4-215ENST00000590371 MT1LQ93083 61 aa6.54□□□□□ -1.36
LDLRAD4-215ENST00000590371 MT1MQ8N339 61 aa6.49□□□□□ -1.37
LDLRAD4-215ENST00000590371 KRTAP12-3P60328 96 aa6.43□□□□□ -1.38
LDLRAD4-215ENST00000590371 KRTAP4-9Q9BYQ8 210 aa6.35□□□□□ -1.39
LDLRAD4-215ENST00000590371 CDC42SE1Q9NRR8 79 aa6.35□□□□□ -1.39
LDLRAD4-215ENST00000590371 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
LDLRAD4-215ENST00000590371 KRTAP4-3Q9BYR4 195 aa6.33□□□□□ -1.4
LDLRAD4-215ENST00000590371 ROMO1P60602 79 aa6.25□□□□□ -1.41
LDLRAD4-215ENST00000590371 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
LDLRAD4-215ENST00000590371 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
LDLRAD4-215ENST00000590371 LCE1DQ5T752 114 aa6.21□□□□□ -1.42
LDLRAD4-215ENST00000590371 KRTAP19-4Q3LI73 84 aa6.19□□□□□ -1.42
LDLRAD4-215ENST00000590371 MT4P47944 62 aa6.18□□□□□ -1.42
LDLRAD4-215ENST00000590371 KRTAP5-4Q6L8H1 288 aa6.09□□□□□ -1.43
LDLRAD4-215ENST00000590371 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
LDLRAD4-215ENST00000590371 HMCN1Q96RW7 5635 aa6.05□□□□□ -1.44
LDLRAD4-215ENST00000590371 GPR98Q8WXG9 6306 aa6□□□□□ -1.45
LDLRAD4-215ENST00000590371 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
LDLRAD4-215ENST00000590371 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
LDLRAD4-215ENST00000590371 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.46
LDLRAD4-215ENST00000590371 KRTAP5-5Q701N2 237 aaPredicted RBP5.9□□□□□ -1.46
LDLRAD4-215ENST00000590371 BRK1Q8WUW1 75 aa5.86□□□□□ -1.47
LDLRAD4-215ENST00000590371 KRTAP12-4P60329 112 aa5.8□□□□□ -1.48
LDLRAD4-215ENST00000590371 AHNAK2Q8IVF2 5795 aa5.79□□□□□ -1.48
LDLRAD4-215ENST00000590371 KRTAP20-2Q3LI61 65 aa5.78□□□□□ -1.48
LDLRAD4-215ENST00000590371 SPRR5A0A1B0GTR4 108 aa5.75□□□□□ -1.49
LDLRAD4-215ENST00000590371 KRTAP5-10Q6L8G5 202 aa5.68□□□□□ -1.5
LDLRAD4-215ENST00000590371 SYNE1Q8NF91 8797 aaKnown RBP5.65□□□□□ -1.5
LDLRAD4-215ENST00000590371 KRTAP5-3Q6L8H2 238 aa5.6□□□□□ -1.51
LDLRAD4-215ENST00000590371 MT1AP04731 61 aa5.57□□□□□ -1.52
LDLRAD4-215ENST00000590371 PMAIP1Q13794 54 aa5.54□□□□□ -1.52
LDLRAD4-215ENST00000590371 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
LDLRAD4-215ENST00000590371 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
LDLRAD4-215ENST00000590371 KRTAP5-7Q6L8G8 165 aa5.45□□□□□ -1.54
LDLRAD4-215ENST00000590371 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
LDLRAD4-215ENST00000590371 KRTAP5-2Q701N4 177 aa5.35□□□□□ -1.55
LDLRAD4-215ENST00000590371 PRO0628Q9UI54 55 aa5.29□□□□□ -1.56
LDLRAD4-215ENST00000590371 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
LDLRAD4-215ENST00000590371 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
LDLRAD4-215ENST00000590371 PRAC1Q96KF2 57 aa5.22□□□□□ -1.57
LDLRAD4-215ENST00000590371 MT3P25713 68 aa5.11□□□□□ -1.59
LDLRAD4-215ENST00000590371 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
LDLRAD4-215ENST00000590371 KTN1-AS1Q86SY8 53 aa5.01□□□□□ -1.61
LDLRAD4-215ENST00000590371 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
LDLRAD4-215ENST00000590371 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
LDLRAD4-215ENST00000590371 KRTAP5-1Q6L8H4 278 aa4.79□□□□□ -1.64
LDLRAD4-215ENST00000590371 SVIPQ8NHG7 77 aa4.78□□□□□ -1.64
LDLRAD4-215ENST00000590371 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
LDLRAD4-215ENST00000590371 MUC5ACP98088 5654 aa4.71□□□□□ -1.66
LDLRAD4-215ENST00000590371 AHNAKQ09666 5890 aaKnown RBP4.7□□□□□ -1.66
LDLRAD4-215ENST00000590371 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
LDLRAD4-215ENST00000590371 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
LDLRAD4-215ENST00000590371 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
LDLRAD4-215ENST00000590371 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
LDLRAD4-215ENST00000590371 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
LDLRAD4-215ENST00000590371 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
LDLRAD4-215ENST00000590371 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
LDLRAD4-215ENST00000590371 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
LDLRAD4-215ENST00000590371 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
LDLRAD4-215ENST00000590371 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
LDLRAD4-215ENST00000590371 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
LDLRAD4-215ENST00000590371 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
LDLRAD4-215ENST00000590371 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
LDLRAD4-215ENST00000590371 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
LDLRAD4-215ENST00000590371 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
LDLRAD4-215ENST00000590371 PRM1P04553 51 aa3.17□□□□□ -1.9
LDLRAD4-215ENST00000590371 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
LDLRAD4-215ENST00000590371 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
LDLRAD4-215ENST00000590371 INE1O15225 51 aa3.07□□□□□ -1.92
LDLRAD4-215ENST00000590371 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
LDLRAD4-215ENST00000590371 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
LDLRAD4-215ENST00000590371 H3BS24 57 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms