RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 PP632Q6XCG6 107 aa7.48□□□□□ -1.21
LRP3-202ENST00000590275 MIR22HGQ0VDD5 57 aa7.37□□□□□ -1.23
LRP3-202ENST00000590275 KRTAP4-7Q9BYR0 210 aa7.35□□□□□ -1.23
LRP3-202ENST00000590275 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
LRP3-202ENST00000590275 LCE1DQ5T752 114 aa7.32□□□□□ -1.24
LRP3-202ENST00000590275 PSPHP1O15172 72 aa7.3□□□□□ -1.24
LRP3-202ENST00000590275 Q1T7F1 81 aa7.25□□□□□ -1.25
LRP3-202ENST00000590275 HMCN1Q96RW7 5635 aa7.25□□□□□ -1.25
LRP3-202ENST00000590275 LCE4AQ5TA78 99 aa7.24□□□□□ -1.25
LRP3-202ENST00000590275 MT4P47944 62 aa7.22□□□□□ -1.25
LRP3-202ENST00000590275 KRTAP5-4Q6L8H1 288 aa7.21□□□□□ -1.26
LRP3-202ENST00000590275 GPR98Q8WXG9 6306 aa7.21□□□□□ -1.26
LRP3-202ENST00000590275 KRTAP25-1Q3LHN0 102 aa7.19□□□□□ -1.26
LRP3-202ENST00000590275 V9GYY9 64 aa7.18□□□□□ -1.26
LRP3-202ENST00000590275 KRTAP4-6Q9BYQ5 205 aa7.09□□□□□ -1.27
LRP3-202ENST00000590275 K7ERS5 55 aa7.07□□□□□ -1.28
LRP3-202ENST00000590275 KRTAP5-5Q701N2 237 aaPredicted RBP6.99□□□□□ -1.29
LRP3-202ENST00000590275 A6NED7 52 aa6.97□□□□□ -1.29
LRP3-202ENST00000590275 AHNAK2Q8IVF2 5795 aa6.96□□□□□ -1.29
LRP3-202ENST00000590275 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
LRP3-202ENST00000590275 KRTAP23-1A1A580 65 aa6.92□□□□□ -1.3
LRP3-202ENST00000590275 RPS28P62857 69 aaKnown RBP6.86□□□□□ -1.31
LRP3-202ENST00000590275 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
LRP3-202ENST00000590275 PCP4P48539 62 aa6.81□□□□□ -1.32
LRP3-202ENST00000590275 KRTAP20-2Q3LI61 65 aa6.79□□□□□ -1.32
LRP3-202ENST00000590275 CDC42SE1Q9NRR8 79 aa6.79□□□□□ -1.32
LRP3-202ENST00000590275 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
LRP3-202ENST00000590275 KRTAP5-10Q6L8G5 202 aa6.78□□□□□ -1.32
LRP3-202ENST00000590275 LCE3CQ5T5A8 94 aa6.77□□□□□ -1.33
LRP3-202ENST00000590275 SYNE1Q8NF91 8797 aaKnown RBP6.77□□□□□ -1.33
LRP3-202ENST00000590275 ROMO1P60602 79 aa6.74□□□□□ -1.33
LRP3-202ENST00000590275 SPRR5A0A1B0GTR4 108 aa6.7□□□□□ -1.34
LRP3-202ENST00000590275 KRTAP12-4P60329 112 aa6.64□□□□□ -1.35
LRP3-202ENST00000590275 KRTAP5-3Q6L8H2 238 aa6.63□□□□□ -1.35
LRP3-202ENST00000590275 KRTAP9-6A8MVA2 160 aa6.54□□□□□ -1.36
LRP3-202ENST00000590275 KRTAP6-1Q3LI64 71 aa6.48□□□□□ -1.37
LRP3-202ENST00000590275 KRTAP5-7Q6L8G8 165 aa6.47□□□□□ -1.37
LRP3-202ENST00000590275 MT1AP04731 61 aa6.46□□□□□ -1.38
LRP3-202ENST00000590275 KRTAP5-2Q701N4 177 aa6.34□□□□□ -1.39
LRP3-202ENST00000590275 KRTAP9-4Q9BYQ2 154 aa6.25□□□□□ -1.41
LRP3-202ENST00000590275 KRTAP4-11Q9BYQ6 195 aa6.17□□□□□ -1.42
LRP3-202ENST00000590275 KRTAP6-2Q3LI66 62 aa6.16□□□□□ -1.42
LRP3-202ENST00000590275 KRTAP5-8O75690 187 aa6.01□□□□□ -1.45
LRP3-202ENST00000590275 BRK1Q8WUW1 75 aa6□□□□□ -1.45
LRP3-202ENST00000590275 OBSCNQ5VST9 7968 aa5.91□□□□□ -1.46
LRP3-202ENST00000590275 MT3P25713 68 aa5.86□□□□□ -1.47
LRP3-202ENST00000590275 MUC5BQ9HC84 5762 aaPredicted RBP5.72□□□□□ -1.49
LRP3-202ENST00000590275 KRTAP5-1Q6L8H4 278 aa5.69□□□□□ -1.5
LRP3-202ENST00000590275 AHNAKQ09666 5890 aaKnown RBP5.66□□□□□ -1.5
LRP3-202ENST00000590275 MUC5ACP98088 5654 aa5.66□□□□□ -1.5
LRP3-202ENST00000590275 PMAIP1Q13794 54 aa5.61□□□□□ -1.51
LRP3-202ENST00000590275 PRAC1Q96KF2 57 aa5.57□□□□□ -1.52
LRP3-202ENST00000590275 KRTAP9-9Q9BYP9 154 aa5.57□□□□□ -1.52
LRP3-202ENST00000590275 LCE1EQ5T753 118 aa5.37□□□□□ -1.55
LRP3-202ENST00000590275 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
LRP3-202ENST00000590275 PRO0628Q9UI54 55 aa5.17□□□□□ -1.58
LRP3-202ENST00000590275 LCE1BQ5T7P3 118 aa5.09□□□□□ -1.59
LRP3-202ENST00000590275 LCE1CQ5T751 118 aa5.01□□□□□ -1.61
LRP3-202ENST00000590275 KTN1-AS1Q86SY8 53 aa4.96□□□□□ -1.62
LRP3-202ENST00000590275 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
LRP3-202ENST00000590275 SVIPQ8NHG7 77 aa4.73□□□□□ -1.65
LRP3-202ENST00000590275 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
LRP3-202ENST00000590275 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.58□□□□□ -1.68
LRP3-202ENST00000590275 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
LRP3-202ENST00000590275 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
LRP3-202ENST00000590275 LUZP6Q538Z0 58 aa4.45□□□□□ -1.7
LRP3-202ENST00000590275 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
LRP3-202ENST00000590275 KRTAP21-2Q3LI59 83 aa4.28□□□□□ -1.72
LRP3-202ENST00000590275 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
LRP3-202ENST00000590275 PHGR1C9JFL3 82 aa3.93□□□□□ -1.78
LRP3-202ENST00000590275 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
LRP3-202ENST00000590275 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
LRP3-202ENST00000590275 PRM1P04553 51 aa3.5□□□□□ -1.85
LRP3-202ENST00000590275 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
LRP3-202ENST00000590275 INE1O15225 51 aa2.8□□□□□ -1.96
LRP3-202ENST00000590275 A0A0A0MQY5 61 aa2.66□□□□□ -1.98
LRP3-202ENST00000590275 MUC16Q8WXI7 14507 aa2.62□□□□□ -1.99
LRP3-202ENST00000590275 H3BS24 57 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 73.1 ms