RNA–Protein interactions for RNA: ENST00000590211.5

CAPNS1-210, Transcript of calpain small subunit 1, humanhuman

TSL 5

Gene CAPNS1, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-210ENST00000590211 KRTAP6-3Q3LI67 103 aa1.8□□□□□ -2.12
CAPNS1-210ENST00000590211 LCE3AQ5TA76 89 aa1.8□□□□□ -2.12
CAPNS1-210ENST00000590211 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
CAPNS1-210ENST00000590211 CRIPTQ9P021 101 aa1.79□□□□□ -2.12
CAPNS1-210ENST00000590211 FLGP20930 4061 aaPredicted RBP1.78□□□□□ -2.12
CAPNS1-210ENST00000590211 PP632Q6XCG6 107 aa1.77□□□□□ -2.13
CAPNS1-210ENST00000590211 M0R2T5 61 aa1.75□□□□□ -2.13
CAPNS1-210ENST00000590211 KRTAP5-5Q701N2 237 aaPredicted RBP1.74□□□□□ -2.13
CAPNS1-210ENST00000590211 C10orf95Q9H7T3 257 aa1.74□□□□□ -2.13
CAPNS1-210ENST00000590211 MT1HP80294 61 aa1.72□□□□□ -2.13
CAPNS1-210ENST00000590211 SPRR2GQ9BYE4 73 aa1.7□□□□□ -2.14
CAPNS1-210ENST00000590211 PLAC4Q8WY50 150 aa1.69□□□□□ -2.14
CAPNS1-210ENST00000590211 MT2AP02795 61 aa1.68□□□□□ -2.14
CAPNS1-210ENST00000590211 TNP1P09430 55 aa1.68□□□□□ -2.14
CAPNS1-210ENST00000590211 SYNE2Q8WXH0 6885 aaKnown RBP1.67□□□□□ -2.14
CAPNS1-210ENST00000590211 MT1FP04733 61 aa1.67□□□□□ -2.14
CAPNS1-210ENST00000590211 INE1O15225 51 aa1.64□□□□□ -2.15
CAPNS1-210ENST00000590211 KRTAP19-8Q3LI54 63 aa1.64□□□□□ -2.15
CAPNS1-210ENST00000590211 SSPOA2VEC9 5147 aa1.63□□□□□ -2.15
CAPNS1-210ENST00000590211 KRTAP20-1Q3LI63 56 aa1.63□□□□□ -2.15
CAPNS1-210ENST00000590211 KRTAP12-3P60328 96 aa1.62□□□□□ -2.15
CAPNS1-210ENST00000590211 NEBP20929 6669 aa1.6□□□□□ -2.15
CAPNS1-210ENST00000590211 MACF1Q9UPN3 7388 aaKnown RBP1.6□□□□□ -2.15
CAPNS1-210ENST00000590211 MT1BP07438 61 aa1.6□□□□□ -2.15
CAPNS1-210ENST00000590211 KRTAP4-4Q9BYR3 166 aa1.6□□□□□ -2.15
CAPNS1-210ENST00000590211 FCGBPQ9Y6R7 5405 aaPredicted RBP1.58□□□□□ -2.16
CAPNS1-210ENST00000590211 MT1XP80297 61 aa1.57□□□□□ -2.16
CAPNS1-210ENST00000590211 KRTAP5-4Q6L8H1 288 aa1.57□□□□□ -2.16
CAPNS1-210ENST00000590211 LCE1CQ5T751 118 aa1.54□□□□□ -2.16
CAPNS1-210ENST00000590211 LCE1BQ5T7P3 118 aa1.54□□□□□ -2.16
CAPNS1-210ENST00000590211 KRTAP2-3P0C7H8 128 aa1.53□□□□□ -2.16
CAPNS1-210ENST00000590211 KRTAP8-1Q8IUC2 63 aa1.53□□□□□ -2.16
CAPNS1-210ENST00000590211 KRTAP2-4Q9BYR9 128 aa1.53□□□□□ -2.16
CAPNS1-210ENST00000590211 GPR98Q8WXG9 6306 aa1.52□□□□□ -2.17
CAPNS1-210ENST00000590211 USH2AO75445 5202 aa1.51□□□□□ -2.17
CAPNS1-210ENST00000590211 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
CAPNS1-210ENST00000590211 KRTAP4-3Q9BYR4 195 aa1.47□□□□□ -2.17
CAPNS1-210ENST00000590211 OBSCNQ5VST9 7968 aa1.47□□□□□ -2.17
CAPNS1-210ENST00000590211 KRTAP19-6Q3LI70 58 aa1.45□□□□□ -2.18
CAPNS1-210ENST00000590211 KRTAP19-5Q3LI72 72 aa1.45□□□□□ -2.18
CAPNS1-210ENST00000590211 KRTAP2-1Q9BYU5 128 aa1.45□□□□□ -2.18
CAPNS1-210ENST00000590211 KMT2DO14686 5537 aa1.42□□□□□ -2.18
CAPNS1-210ENST00000590211 MUC12Q9UKN1 5478 aa1.42□□□□□ -2.18
CAPNS1-210ENST00000590211 KRTAP5-9P26371 169 aa1.42□□□□□ -2.18
CAPNS1-210ENST00000590211 KRTAP19-7Q3SYF9 63 aa1.4□□□□□ -2.19
CAPNS1-210ENST00000590211 MT1EP04732 61 aa1.38□□□□□ -2.19
CAPNS1-210ENST00000590211 MT1LQ93083 61 aa1.36□□□□□ -2.19
CAPNS1-210ENST00000590211 KRTAP5-7Q6L8G8 165 aa1.35□□□□□ -2.19
CAPNS1-210ENST00000590211 MDN1Q9NU22 5596 aa1.35□□□□□ -2.19
CAPNS1-210ENST00000590211 SPRR2EP22531 72 aa1.32□□□□□ -2.2
CAPNS1-210ENST00000590211 SPRR2BP35325 72 aa1.32□□□□□ -2.2
CAPNS1-210ENST00000590211 SPRR2AP35326 72 aa1.32□□□□□ -2.2
CAPNS1-210ENST00000590211 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
CAPNS1-210ENST00000590211 MT1GP13640 62 aa1.3□□□□□ -2.2
CAPNS1-210ENST00000590211 DSTQ03001 7570 aaKnown RBP1.3□□□□□ -2.2
CAPNS1-210ENST00000590211 MT1MQ8N339 61 aa1.29□□□□□ -2.2
CAPNS1-210ENST00000590211 SPRR2FQ96RM1 72 aa1.29□□□□□ -2.2
CAPNS1-210ENST00000590211 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.2
CAPNS1-210ENST00000590211 SPRR2DP22532 72 aa1.28□□□□□ -2.2
CAPNS1-210ENST00000590211 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
CAPNS1-210ENST00000590211 KRTAP5-2Q701N4 177 aa1.23□□□□□ -2.21
CAPNS1-210ENST00000590211 HMCN1Q96RW7 5635 aa1.22□□□□□ -2.21
CAPNS1-210ENST00000590211 MUC19Q7Z5P9 8384 aa1.21□□□□□ -2.22
CAPNS1-210ENST00000590211 AHNAKQ09666 5890 aaKnown RBP1.19□□□□□ -2.22
CAPNS1-210ENST00000590211 MT1AP04731 61 aa1.17□□□□□ -2.22
CAPNS1-210ENST00000590211 MT4P47944 62 aa1.14□□□□□ -2.23
CAPNS1-210ENST00000590211 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
CAPNS1-210ENST00000590211 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
CAPNS1-210ENST00000590211 MUC5ACP98088 5654 aa1.1□□□□□ -2.23
CAPNS1-210ENST00000590211 SYNE1Q8NF91 8797 aaKnown RBP1.1□□□□□ -2.23
CAPNS1-210ENST00000590211 MUC5BQ9HC84 5762 aaPredicted RBP1.06□□□□□ -2.24
CAPNS1-210ENST00000590211 KRTAP6-2Q3LI66 62 aa1.03□□□□□ -2.24
CAPNS1-210ENST00000590211 KRTAP5-8O75690 187 aa1.01□□□□□ -2.25
CAPNS1-210ENST00000590211 KRTAP20-2Q3LI61 65 aa0.99□□□□□ -2.25
CAPNS1-210ENST00000590211 PRM1P04553 51 aa0.97□□□□□ -2.25
CAPNS1-210ENST00000590211 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
CAPNS1-210ENST00000590211 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
CAPNS1-210ENST00000590211 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 86.5 ms