RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 MIR22HGQ0VDD5 57 aa6.5□□□□□ -1.37
CIRBP-227ENST00000590188 A6NED7 52 aa6.48□□□□□ -1.37
CIRBP-227ENST00000590188 MT1GP13640 62 aa6.46□□□□□ -1.38
CIRBP-227ENST00000590188 MT1LQ93083 61 aa6.42□□□□□ -1.38
CIRBP-227ENST00000590188 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
CIRBP-227ENST00000590188 MT1MQ8N339 61 aa6.39□□□□□ -1.39
CIRBP-227ENST00000590188 KRTAP4-9Q9BYQ8 210 aa6.35□□□□□ -1.39
CIRBP-227ENST00000590188 KRTAP4-3Q9BYR4 195 aa6.31□□□□□ -1.4
CIRBP-227ENST00000590188 K7ERS5 55 aa6.3□□□□□ -1.4
CIRBP-227ENST00000590188 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
CIRBP-227ENST00000590188 CDC42SE1Q9NRR8 79 aa6.23□□□□□ -1.41
CIRBP-227ENST00000590188 LCE1DQ5T752 114 aa6.17□□□□□ -1.42
CIRBP-227ENST00000590188 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
CIRBP-227ENST00000590188 GPR98Q8WXG9 6306 aa6.15□□□□□ -1.42
CIRBP-227ENST00000590188 MT4P47944 62 aa6.15□□□□□ -1.42
CIRBP-227ENST00000590188 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
CIRBP-227ENST00000590188 LCE4AQ5TA78 99 aa6.13□□□□□ -1.43
CIRBP-227ENST00000590188 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
CIRBP-227ENST00000590188 HMCN1Q96RW7 5635 aa6.07□□□□□ -1.44
CIRBP-227ENST00000590188 KRTAP5-4Q6L8H1 288 aa6.02□□□□□ -1.45
CIRBP-227ENST00000590188 KRTAP4-6Q9BYQ5 205 aa5.95□□□□□ -1.46
CIRBP-227ENST00000590188 ROMO1P60602 79 aa5.94□□□□□ -1.46
CIRBP-227ENST00000590188 AHNAK2Q8IVF2 5795 aa5.89□□□□□ -1.47
CIRBP-227ENST00000590188 LOC100996750A0A140TA64 210 aa5.85□□□□□ -1.47
CIRBP-227ENST00000590188 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
CIRBP-227ENST00000590188 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
CIRBP-227ENST00000590188 KRTAP5-5Q701N2 237 aaPredicted RBP5.82□□□□□ -1.48
CIRBP-227ENST00000590188 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
CIRBP-227ENST00000590188 LCE3CQ5T5A8 94 aa5.73□□□□□ -1.49
CIRBP-227ENST00000590188 KRTAP20-2Q3LI61 65 aa5.72□□□□□ -1.49
CIRBP-227ENST00000590188 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
CIRBP-227ENST00000590188 PMAIP1Q13794 54 aa5.69□□□□□ -1.5
CIRBP-227ENST00000590188 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
CIRBP-227ENST00000590188 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
CIRBP-227ENST00000590188 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
CIRBP-227ENST00000590188 PRO0628Q9UI54 55 aa5.63□□□□□ -1.51
CIRBP-227ENST00000590188 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
CIRBP-227ENST00000590188 MT1AP04731 61 aa5.45□□□□□ -1.54
CIRBP-227ENST00000590188 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
CIRBP-227ENST00000590188 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
CIRBP-227ENST00000590188 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
CIRBP-227ENST00000590188 KRTAP5-7Q6L8G8 165 aa5.43□□□□□ -1.54
CIRBP-227ENST00000590188 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
CIRBP-227ENST00000590188 KRTAP5-2Q701N4 177 aa5.28□□□□□ -1.56
CIRBP-227ENST00000590188 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
CIRBP-227ENST00000590188 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
CIRBP-227ENST00000590188 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
CIRBP-227ENST00000590188 SVIPQ8NHG7 77 aa5.16□□□□□ -1.58
CIRBP-227ENST00000590188 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
CIRBP-227ENST00000590188 KRTAP5-8O75690 187 aa5.02□□□□□ -1.61
CIRBP-227ENST00000590188 MT3P25713 68 aa4.98□□□□□ -1.61
CIRBP-227ENST00000590188 AHNAKQ09666 5890 aaKnown RBP4.82□□□□□ -1.64
CIRBP-227ENST00000590188 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
CIRBP-227ENST00000590188 KRTAP9-9Q9BYP9 154 aa4.76□□□□□ -1.65
CIRBP-227ENST00000590188 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
CIRBP-227ENST00000590188 KRTAP5-1Q6L8H4 278 aa4.74□□□□□ -1.65
CIRBP-227ENST00000590188 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
CIRBP-227ENST00000590188 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
CIRBP-227ENST00000590188 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
CIRBP-227ENST00000590188 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
CIRBP-227ENST00000590188 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
CIRBP-227ENST00000590188 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
CIRBP-227ENST00000590188 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
CIRBP-227ENST00000590188 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
CIRBP-227ENST00000590188 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
CIRBP-227ENST00000590188 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
CIRBP-227ENST00000590188 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
CIRBP-227ENST00000590188 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
CIRBP-227ENST00000590188 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
CIRBP-227ENST00000590188 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
CIRBP-227ENST00000590188 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
CIRBP-227ENST00000590188 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
CIRBP-227ENST00000590188 INE1O15225 51 aa3.26□□□□□ -1.89
CIRBP-227ENST00000590188 PRM1P04553 51 aa3.11□□□□□ -1.91
CIRBP-227ENST00000590188 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
CIRBP-227ENST00000590188 H3BS24 57 aa2.8□□□□□ -1.96
CIRBP-227ENST00000590188 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
CIRBP-227ENST00000590188 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms