RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 MT1MQ8N339 61 aa7.31□□□□□ -1.24
CIRBP-226ENST00000590171 KRTAP4-9Q9BYQ8 210 aa7.31□□□□□ -1.24
CIRBP-226ENST00000590171 MIR22HGQ0VDD5 57 aa7.24□□□□□ -1.25
CIRBP-226ENST00000590171 V9GYY9 64 aa7.24□□□□□ -1.25
CIRBP-226ENST00000590171 PSPHP1O15172 72 aa7.19□□□□□ -1.26
CIRBP-226ENST00000590171 Q1T7F1 81 aa7.17□□□□□ -1.26
CIRBP-226ENST00000590171 GPR98Q8WXG9 6306 aa7.16□□□□□ -1.26
CIRBP-226ENST00000590171 KRTAP4-3Q9BYR4 195 aa7.16□□□□□ -1.26
CIRBP-226ENST00000590171 LCE1DQ5T752 114 aa7.14□□□□□ -1.27
CIRBP-226ENST00000590171 LCE4AQ5TA78 99 aa7.11□□□□□ -1.27
CIRBP-226ENST00000590171 K7ERS5 55 aa7.09□□□□□ -1.27
CIRBP-226ENST00000590171 KRTAP12-3P60328 96 aa7.06□□□□□ -1.28
CIRBP-226ENST00000590171 MT4P47944 62 aa7.05□□□□□ -1.28
CIRBP-226ENST00000590171 HMCN1Q96RW7 5635 aa7.02□□□□□ -1.29
CIRBP-226ENST00000590171 KRTAP4-7Q9BYR0 210 aa7□□□□□ -1.29
CIRBP-226ENST00000590171 KRTAP5-4Q6L8H1 288 aa6.99□□□□□ -1.29
CIRBP-226ENST00000590171 A6NED7 52 aa6.97□□□□□ -1.29
CIRBP-226ENST00000590171 KRTAP25-1Q3LHN0 102 aa6.96□□□□□ -1.3
CIRBP-226ENST00000590171 KRTAP4-6Q9BYQ5 205 aa6.86□□□□□ -1.31
CIRBP-226ENST00000590171 PRO0628Q9UI54 55 aa6.84□□□□□ -1.31
CIRBP-226ENST00000590171 SVIPQ8NHG7 77 aa6.83□□□□□ -1.32
CIRBP-226ENST00000590171 BRK1Q8WUW1 75 aa6.82□□□□□ -1.32
CIRBP-226ENST00000590171 AHNAK2Q8IVF2 5795 aa6.78□□□□□ -1.32
CIRBP-226ENST00000590171 CDC42SE1Q9NRR8 79 aa6.73□□□□□ -1.33
CIRBP-226ENST00000590171 KRTAP5-5Q701N2 237 aaPredicted RBP6.72□□□□□ -1.33
CIRBP-226ENST00000590171 KRTAP23-1A1A580 65 aa6.68□□□□□ -1.34
CIRBP-226ENST00000590171 KRTAP5-10Q6L8G5 202 aa6.64□□□□□ -1.35
CIRBP-226ENST00000590171 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
CIRBP-226ENST00000590171 ROMO1P60602 79 aa6.62□□□□□ -1.35
CIRBP-226ENST00000590171 KRTAP19-4Q3LI73 84 aa6.61□□□□□ -1.35
CIRBP-226ENST00000590171 KRTAP20-2Q3LI61 65 aa6.6□□□□□ -1.35
CIRBP-226ENST00000590171 KRTAP15-1Q3LI76 137 aa6.58□□□□□ -1.36
CIRBP-226ENST00000590171 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
CIRBP-226ENST00000590171 KRTAP12-4P60329 112 aa6.51□□□□□ -1.37
CIRBP-226ENST00000590171 LCE3CQ5T5A8 94 aa6.5□□□□□ -1.37
CIRBP-226ENST00000590171 SYNE1Q8NF91 8797 aaKnown RBP6.49□□□□□ -1.37
CIRBP-226ENST00000590171 KRTAP5-3Q6L8H2 238 aa6.49□□□□□ -1.37
CIRBP-226ENST00000590171 PMAIP1Q13794 54 aa6.45□□□□□ -1.38
CIRBP-226ENST00000590171 KRTAP5-7Q6L8G8 165 aa6.37□□□□□ -1.39
CIRBP-226ENST00000590171 KTN1-AS1Q86SY8 53 aa6.31□□□□□ -1.4
CIRBP-226ENST00000590171 MT1AP04731 61 aa6.24□□□□□ -1.41
CIRBP-226ENST00000590171 KRTAP6-1Q3LI64 71 aa6.21□□□□□ -1.42
CIRBP-226ENST00000590171 KRTAP9-6A8MVA2 160 aa6.17□□□□□ -1.42
CIRBP-226ENST00000590171 KRTAP5-2Q701N4 177 aa6.12□□□□□ -1.43
CIRBP-226ENST00000590171 KRTAP9-4Q9BYQ2 154 aa6.02□□□□□ -1.45
CIRBP-226ENST00000590171 KRTAP4-11Q9BYQ6 195 aa6.02□□□□□ -1.45
CIRBP-226ENST00000590171 PRAC1Q96KF2 57 aa5.99□□□□□ -1.45
CIRBP-226ENST00000590171 KRTAP6-2Q3LI66 62 aa5.93□□□□□ -1.46
CIRBP-226ENST00000590171 KRTAP5-8O75690 187 aa5.83□□□□□ -1.48
CIRBP-226ENST00000590171 OBSCNQ5VST9 7968 aa5.77□□□□□ -1.49
CIRBP-226ENST00000590171 MT3P25713 68 aa5.69□□□□□ -1.5
CIRBP-226ENST00000590171 MUC5ACP98088 5654 aa5.59□□□□□ -1.51
CIRBP-226ENST00000590171 AHNAKQ09666 5890 aaKnown RBP5.59□□□□□ -1.51
CIRBP-226ENST00000590171 MUC5BQ9HC84 5762 aaPredicted RBP5.57□□□□□ -1.52
CIRBP-226ENST00000590171 KRTAP9-9Q9BYP9 154 aa5.51□□□□□ -1.53
CIRBP-226ENST00000590171 KRTAP5-1Q6L8H4 278 aa5.5□□□□□ -1.53
CIRBP-226ENST00000590171 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
CIRBP-226ENST00000590171 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
CIRBP-226ENST00000590171 LCE1BQ5T7P3 118 aa4.94□□□□□ -1.62
CIRBP-226ENST00000590171 NDUFAF8A1L188 74 aa4.9□□□□□ -1.63
CIRBP-226ENST00000590171 LUZP6Q538Z0 58 aa4.89□□□□□ -1.63
CIRBP-226ENST00000590171 LCE1CQ5T751 118 aa4.86□□□□□ -1.63
CIRBP-226ENST00000590171 H3BS24 57 aa4.68□□□□□ -1.66
CIRBP-226ENST00000590171 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
CIRBP-226ENST00000590171 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
CIRBP-226ENST00000590171 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
CIRBP-226ENST00000590171 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
CIRBP-226ENST00000590171 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
CIRBP-226ENST00000590171 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
CIRBP-226ENST00000590171 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
CIRBP-226ENST00000590171 INE1O15225 51 aa4.13□□□□□ -1.75
CIRBP-226ENST00000590171 KRTAP21-2Q3LI59 83 aa4.09□□□□□ -1.75
CIRBP-226ENST00000590171 PHGR1C9JFL3 82 aa3.87□□□□□ -1.79
CIRBP-226ENST00000590171 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
CIRBP-226ENST00000590171 MUC19Q7Z5P9 8384 aa3.56□□□□□ -1.84
CIRBP-226ENST00000590171 PRM1P04553 51 aa3.4□□□□□ -1.87
CIRBP-226ENST00000590171 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
CIRBP-226ENST00000590171 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms