RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 UQCR11O14957 56 aa5.11□□□□□ -1.59
SAFB2-205ENST00000590000 MT1GP13640 62 aa5.09□□□□□ -1.59
SAFB2-205ENST00000590000 TNP1P09430 55 aa5.08□□□□□ -1.6
SAFB2-205ENST00000590000 MT1MQ8N339 61 aa5.08□□□□□ -1.6
SAFB2-205ENST00000590000 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
SAFB2-205ENST00000590000 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
SAFB2-205ENST00000590000 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
SAFB2-205ENST00000590000 LCE3AQ5TA76 89 aa5.05□□□□□ -1.6
SAFB2-205ENST00000590000 PSPHP1O15172 72 aa5.03□□□□□ -1.6
SAFB2-205ENST00000590000 MIR22HGQ0VDD5 57 aa5.03□□□□□ -1.6
SAFB2-205ENST00000590000 MT1LQ93083 61 aa5.01□□□□□ -1.61
SAFB2-205ENST00000590000 Q1T7F1 81 aa4.97□□□□□ -1.61
SAFB2-205ENST00000590000 V9GYY9 64 aa4.97□□□□□ -1.61
SAFB2-205ENST00000590000 KRTAP5-7Q6L8G8 165 aa4.94□□□□□ -1.62
SAFB2-205ENST00000590000 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
SAFB2-205ENST00000590000 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
SAFB2-205ENST00000590000 K7ERS5 55 aa4.87□□□□□ -1.63
SAFB2-205ENST00000590000 PCP4P48539 62 aa4.84□□□□□ -1.63
SAFB2-205ENST00000590000 KRTAP12-3P60328 96 aa4.84□□□□□ -1.63
SAFB2-205ENST00000590000 KRTAP4-7Q9BYR0 210 aa4.84□□□□□ -1.63
SAFB2-205ENST00000590000 A6NED7 52 aa4.82□□□□□ -1.64
SAFB2-205ENST00000590000 KRTAP25-1Q3LHN0 102 aa4.81□□□□□ -1.64
SAFB2-205ENST00000590000 KRTAP20-2Q3LI61 65 aa4.79□□□□□ -1.64
SAFB2-205ENST00000590000 RPS28P62857 69 aaKnown RBP4.78□□□□□ -1.64
SAFB2-205ENST00000590000 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
SAFB2-205ENST00000590000 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
SAFB2-205ENST00000590000 CDC42SE1Q9NRR8 79 aa4.64□□□□□ -1.67
SAFB2-205ENST00000590000 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
SAFB2-205ENST00000590000 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
SAFB2-205ENST00000590000 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
SAFB2-205ENST00000590000 ROMO1P60602 79 aa4.6□□□□□ -1.67
SAFB2-205ENST00000590000 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
SAFB2-205ENST00000590000 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
SAFB2-205ENST00000590000 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
SAFB2-205ENST00000590000 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
SAFB2-205ENST00000590000 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
SAFB2-205ENST00000590000 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
SAFB2-205ENST00000590000 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
SAFB2-205ENST00000590000 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
SAFB2-205ENST00000590000 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
SAFB2-205ENST00000590000 MUC5BQ9HC84 5762 aaPredicted RBP4.27□□□□□ -1.73
SAFB2-205ENST00000590000 AHNAKQ09666 5890 aaKnown RBP4.27□□□□□ -1.73
SAFB2-205ENST00000590000 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
SAFB2-205ENST00000590000 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
SAFB2-205ENST00000590000 MT1AP04731 61 aa4.22□□□□□ -1.73
SAFB2-205ENST00000590000 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.74
SAFB2-205ENST00000590000 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
SAFB2-205ENST00000590000 KRTAP9-4Q9BYQ2 154 aa4.12□□□□□ -1.75
SAFB2-205ENST00000590000 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
SAFB2-205ENST00000590000 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
SAFB2-205ENST00000590000 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
SAFB2-205ENST00000590000 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
SAFB2-205ENST00000590000 MT3P25713 68 aa3.84□□□□□ -1.79
SAFB2-205ENST00000590000 PRO0628Q9UI54 55 aa3.71□□□□□ -1.82
SAFB2-205ENST00000590000 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
SAFB2-205ENST00000590000 KRTAP4-2Q9BYR5 136 aa3.56□□□□□ -1.84
SAFB2-205ENST00000590000 KTN1-AS1Q86SY8 53 aa3.52□□□□□ -1.85
SAFB2-205ENST00000590000 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
SAFB2-205ENST00000590000 SVIPQ8NHG7 77 aa3.42□□□□□ -1.86
SAFB2-205ENST00000590000 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
SAFB2-205ENST00000590000 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
SAFB2-205ENST00000590000 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
SAFB2-205ENST00000590000 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
SAFB2-205ENST00000590000 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
SAFB2-205ENST00000590000 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
SAFB2-205ENST00000590000 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
SAFB2-205ENST00000590000 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
SAFB2-205ENST00000590000 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
SAFB2-205ENST00000590000 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
SAFB2-205ENST00000590000 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
SAFB2-205ENST00000590000 NDUFAF8A1L188 74 aa2.66□□□□□ -1.98
SAFB2-205ENST00000590000 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
SAFB2-205ENST00000590000 PRM1P04553 51 aa2.38□□□□□ -2.03
SAFB2-205ENST00000590000 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
SAFB2-205ENST00000590000 INE1O15225 51 aa2.07□□□□□ -2.08
SAFB2-205ENST00000590000 A0A0A0MQY5 61 aa2.06□□□□□ -2.08
SAFB2-205ENST00000590000 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
SAFB2-205ENST00000590000 H3BS24 57 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 181.3 ms