RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 MUC12Q9UKN1 5478 aa6.33□□□□□ -1.4
CXXC1-212ENST00000589940 KRTAP6-3Q3LI67 103 aa6.27□□□□□ -1.4
CXXC1-212ENST00000589940 MT1LQ93083 61 aa6.22□□□□□ -1.41
CXXC1-212ENST00000589940 MDN1Q9NU22 5596 aa6.22□□□□□ -1.41
CXXC1-212ENST00000589940 KRTAP19-3Q7Z4W3 81 aa6.15□□□□□ -1.43
CXXC1-212ENST00000589940 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
CXXC1-212ENST00000589940 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
CXXC1-212ENST00000589940 MT1GP13640 62 aa6.09□□□□□ -1.44
CXXC1-212ENST00000589940 LCE1AQ5T7P2 110 aa6.09□□□□□ -1.44
CXXC1-212ENST00000589940 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
CXXC1-212ENST00000589940 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
CXXC1-212ENST00000589940 SPRR2EP22531 72 aa6.05□□□□□ -1.44
CXXC1-212ENST00000589940 SPRR2BP35325 72 aa6.05□□□□□ -1.44
CXXC1-212ENST00000589940 SPRR2AP35326 72 aa6.05□□□□□ -1.44
CXXC1-212ENST00000589940 MT1MQ8N339 61 aa6.01□□□□□ -1.45
CXXC1-212ENST00000589940 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
CXXC1-212ENST00000589940 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
CXXC1-212ENST00000589940 NEBP20929 6669 aa5.95□□□□□ -1.46
CXXC1-212ENST00000589940 KRTAP4-3Q9BYR4 195 aa5.87□□□□□ -1.47
CXXC1-212ENST00000589940 SPRR2DP22532 72 aa5.84□□□□□ -1.47
CXXC1-212ENST00000589940 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
CXXC1-212ENST00000589940 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
CXXC1-212ENST00000589940 INE1O15225 51 aa5.64□□□□□ -1.51
CXXC1-212ENST00000589940 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
CXXC1-212ENST00000589940 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
CXXC1-212ENST00000589940 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
CXXC1-212ENST00000589940 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
CXXC1-212ENST00000589940 KRTAP20-1Q3LI63 56 aa5.44□□□□□ -1.54
CXXC1-212ENST00000589940 KRTAP5-5Q701N2 237 aaPredicted RBP5.43□□□□□ -1.54
CXXC1-212ENST00000589940 KRTAP2-2Q9BYT5 123 aa5.38□□□□□ -1.55
CXXC1-212ENST00000589940 KRTAP2-1Q9BYU5 128 aa5.38□□□□□ -1.55
CXXC1-212ENST00000589940 MT1AP04731 61 aa5.29□□□□□ -1.56
CXXC1-212ENST00000589940 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
CXXC1-212ENST00000589940 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
CXXC1-212ENST00000589940 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
CXXC1-212ENST00000589940 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
CXXC1-212ENST00000589940 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
CXXC1-212ENST00000589940 MT4P47944 62 aa5.06□□□□□ -1.6
CXXC1-212ENST00000589940 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
CXXC1-212ENST00000589940 KRTAP9-4Q9BYQ2 154 aa5.03□□□□□ -1.6
CXXC1-212ENST00000589940 HMCN1Q96RW7 5635 aa5.03□□□□□ -1.6
CXXC1-212ENST00000589940 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
CXXC1-212ENST00000589940 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
CXXC1-212ENST00000589940 KRTAP20-2Q3LI61 65 aa4.92□□□□□ -1.62
CXXC1-212ENST00000589940 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
CXXC1-212ENST00000589940 MT3P25713 68 aa4.8□□□□□ -1.64
CXXC1-212ENST00000589940 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
CXXC1-212ENST00000589940 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
CXXC1-212ENST00000589940 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
CXXC1-212ENST00000589940 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
CXXC1-212ENST00000589940 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
CXXC1-212ENST00000589940 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
CXXC1-212ENST00000589940 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
CXXC1-212ENST00000589940 KRTAP5-10Q6L8G5 202 aa4.23□□□□□ -1.73
CXXC1-212ENST00000589940 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
CXXC1-212ENST00000589940 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.74
CXXC1-212ENST00000589940 KRTAP5-8O75690 187 aa4.13□□□□□ -1.75
CXXC1-212ENST00000589940 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
CXXC1-212ENST00000589940 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
CXXC1-212ENST00000589940 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
CXXC1-212ENST00000589940 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
CXXC1-212ENST00000589940 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
CXXC1-212ENST00000589940 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
CXXC1-212ENST00000589940 PRM1P04553 51 aa3.91□□□□□ -1.78
CXXC1-212ENST00000589940 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
CXXC1-212ENST00000589940 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
CXXC1-212ENST00000589940 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
CXXC1-212ENST00000589940 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
CXXC1-212ENST00000589940 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
CXXC1-212ENST00000589940 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
CXXC1-212ENST00000589940 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
CXXC1-212ENST00000589940 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
CXXC1-212ENST00000589940 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
CXXC1-212ENST00000589940 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
CXXC1-212ENST00000589940 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
CXXC1-212ENST00000589940 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
CXXC1-212ENST00000589940 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 8.8 ms