RNA–Protein interactions for RNA: ENST00000589877.5

SMAD2-211, Transcript of SMAD family member 2, humanhuman

TSL 3

Gene SMAD2, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-211ENST00000589877 LCE4AQ5TA78 99 aa5.95□□□□□ -1.46
SMAD2-211ENST00000589877 MT1LQ93083 61 aa5.94□□□□□ -1.46
SMAD2-211ENST00000589877 MT4P47944 62 aa5.91□□□□□ -1.46
SMAD2-211ENST00000589877 LINC01558Q9Y6Z2 57 aa5.91□□□□□ -1.46
SMAD2-211ENST00000589877 A0A1B0GU69 56 aa5.86□□□□□ -1.47
SMAD2-211ENST00000589877 A8MU10 97 aa5.86□□□□□ -1.47
SMAD2-211ENST00000589877 PSPHP1O15172 72 aa5.86□□□□□ -1.47
SMAD2-211ENST00000589877 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
SMAD2-211ENST00000589877 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
SMAD2-211ENST00000589877 HMCN1Q96RW7 5635 aa5.84□□□□□ -1.47
SMAD2-211ENST00000589877 PRR15LQ9BU68 103 aa5.84□□□□□ -1.47
SMAD2-211ENST00000589877 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
SMAD2-211ENST00000589877 TNP1P09430 55 aa5.82□□□□□ -1.48
SMAD2-211ENST00000589877 KRTAP5-4Q6L8H1 288 aa5.81□□□□□ -1.48
SMAD2-211ENST00000589877 CDC42SE1Q9NRR8 79 aa5.8□□□□□ -1.48
SMAD2-211ENST00000589877 A6NED7 52 aa5.77□□□□□ -1.49
SMAD2-211ENST00000589877 KRTAP4-6Q9BYQ5 205 aa5.74□□□□□ -1.49
SMAD2-211ENST00000589877 PMAIP1Q13794 54 aa5.72□□□□□ -1.49
SMAD2-211ENST00000589877 AHNAK2Q8IVF2 5795 aa5.68□□□□□ -1.5
SMAD2-211ENST00000589877 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
SMAD2-211ENST00000589877 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
SMAD2-211ENST00000589877 KTN1-AS1Q86SY8 53 aa5.64□□□□□ -1.51
SMAD2-211ENST00000589877 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
SMAD2-211ENST00000589877 UQCR11O14957 56 aa5.62□□□□□ -1.51
SMAD2-211ENST00000589877 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
SMAD2-211ENST00000589877 KRTAP5-3Q6L8H2 238 aa5.5□□□□□ -1.53
SMAD2-211ENST00000589877 KRTAP5-5Q701N2 237 aaPredicted RBP5.5□□□□□ -1.53
SMAD2-211ENST00000589877 KRTAP20-2Q3LI61 65 aa5.49□□□□□ -1.53
SMAD2-211ENST00000589877 KRTAP5-7Q6L8G8 165 aa5.47□□□□□ -1.53
SMAD2-211ENST00000589877 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
SMAD2-211ENST00000589877 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
SMAD2-211ENST00000589877 KRTAP25-1Q3LHN0 102 aa5.38□□□□□ -1.55
SMAD2-211ENST00000589877 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
SMAD2-211ENST00000589877 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
SMAD2-211ENST00000589877 K7ERS5 55 aa5.33□□□□□ -1.56
SMAD2-211ENST00000589877 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
SMAD2-211ENST00000589877 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
SMAD2-211ENST00000589877 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
SMAD2-211ENST00000589877 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
SMAD2-211ENST00000589877 PRAC1Q96KF2 57 aa5.14□□□□□ -1.59
SMAD2-211ENST00000589877 ROMO1P60602 79 aa5.09□□□□□ -1.59
SMAD2-211ENST00000589877 KRTAP5-2Q701N4 177 aa5.06□□□□□ -1.6
SMAD2-211ENST00000589877 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
SMAD2-211ENST00000589877 MT1AP04731 61 aa5.05□□□□□ -1.6
SMAD2-211ENST00000589877 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
SMAD2-211ENST00000589877 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
SMAD2-211ENST00000589877 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.63
SMAD2-211ENST00000589877 KRTAP5-8O75690 187 aa4.9□□□□□ -1.63
SMAD2-211ENST00000589877 KRTAP6-2Q3LI66 62 aa4.86□□□□□ -1.63
SMAD2-211ENST00000589877 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
SMAD2-211ENST00000589877 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
SMAD2-211ENST00000589877 MUC5ACP98088 5654 aa4.71□□□□□ -1.66
SMAD2-211ENST00000589877 MUC5BQ9HC84 5762 aaPredicted RBP4.7□□□□□ -1.66
SMAD2-211ENST00000589877 KRTAP9-9Q9BYP9 154 aa4.67□□□□□ -1.66
SMAD2-211ENST00000589877 MT3P25713 68 aa4.64□□□□□ -1.67
SMAD2-211ENST00000589877 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
SMAD2-211ENST00000589877 H3BS24 57 aa4.49□□□□□ -1.69
SMAD2-211ENST00000589877 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
SMAD2-211ENST00000589877 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
SMAD2-211ENST00000589877 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
SMAD2-211ENST00000589877 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
SMAD2-211ENST00000589877 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
SMAD2-211ENST00000589877 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
SMAD2-211ENST00000589877 LCE1CQ5T751 118 aa4□□□□□ -1.77
SMAD2-211ENST00000589877 INE1O15225 51 aa3.8□□□□□ -1.8
SMAD2-211ENST00000589877 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
SMAD2-211ENST00000589877 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
SMAD2-211ENST00000589877 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
SMAD2-211ENST00000589877 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
SMAD2-211ENST00000589877 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
SMAD2-211ENST00000589877 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
SMAD2-211ENST00000589877 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
SMAD2-211ENST00000589877 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
SMAD2-211ENST00000589877 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
SMAD2-211ENST00000589877 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
SMAD2-211ENST00000589877 PRM1P04553 51 aa2.61□□□□□ -1.99
SMAD2-211ENST00000589877 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
SMAD2-211ENST00000589877 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 100.5 ms