RNA–Protein interactions for RNA: ENST00000589872.1

NBR1-205, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NBR1, Length 3,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-205ENST00000589872 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
NBR1-205ENST00000589872 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
NBR1-205ENST00000589872 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
NBR1-205ENST00000589872 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
NBR1-205ENST00000589872 MT1LQ93083 61 aa4.15□□□□□ -1.75
NBR1-205ENST00000589872 MT1EP04732 61 aa4.09□□□□□ -1.75
NBR1-205ENST00000589872 FCGBPQ9Y6R7 5405 aaPredicted RBP4.08□□□□□ -1.76
NBR1-205ENST00000589872 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
NBR1-205ENST00000589872 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
NBR1-205ENST00000589872 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
NBR1-205ENST00000589872 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
NBR1-205ENST00000589872 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
NBR1-205ENST00000589872 MT1GP13640 62 aa3.96□□□□□ -1.78
NBR1-205ENST00000589872 NEBP20929 6669 aa3.88□□□□□ -1.79
NBR1-205ENST00000589872 MUC12Q9UKN1 5478 aa3.86□□□□□ -1.79
NBR1-205ENST00000589872 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
NBR1-205ENST00000589872 MT1MQ8N339 61 aa3.81□□□□□ -1.8
NBR1-205ENST00000589872 FSIP2Q5CZC0 6907 aa3.78□□□□□ -1.8
NBR1-205ENST00000589872 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
NBR1-205ENST00000589872 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
NBR1-205ENST00000589872 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
NBR1-205ENST00000589872 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
NBR1-205ENST00000589872 MACF1Q9UPN3 7388 aaKnown RBP3.74□□□□□ -1.81
NBR1-205ENST00000589872 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
NBR1-205ENST00000589872 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
NBR1-205ENST00000589872 SPRR2EP22531 72 aa3.7□□□□□ -1.82
NBR1-205ENST00000589872 SPRR2BP35325 72 aa3.7□□□□□ -1.82
NBR1-205ENST00000589872 SPRR2AP35326 72 aa3.7□□□□□ -1.82
NBR1-205ENST00000589872 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
NBR1-205ENST00000589872 LCE5AQ5TCM9 118 aa3.64□□□□□ -1.83
NBR1-205ENST00000589872 SPRR2DP22532 72 aa3.62□□□□□ -1.83
NBR1-205ENST00000589872 MT1AP04731 61 aa3.58□□□□□ -1.84
NBR1-205ENST00000589872 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
NBR1-205ENST00000589872 PRM1P04553 51 aa3.57□□□□□ -1.84
NBR1-205ENST00000589872 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
NBR1-205ENST00000589872 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
NBR1-205ENST00000589872 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
NBR1-205ENST00000589872 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
NBR1-205ENST00000589872 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
NBR1-205ENST00000589872 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
NBR1-205ENST00000589872 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
NBR1-205ENST00000589872 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
NBR1-205ENST00000589872 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.88
NBR1-205ENST00000589872 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
NBR1-205ENST00000589872 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
NBR1-205ENST00000589872 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
NBR1-205ENST00000589872 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
NBR1-205ENST00000589872 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
NBR1-205ENST00000589872 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
NBR1-205ENST00000589872 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
NBR1-205ENST00000589872 MT3P25713 68 aa3.06□□□□□ -1.92
NBR1-205ENST00000589872 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
NBR1-205ENST00000589872 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
NBR1-205ENST00000589872 KRTAP4-6Q9BYQ5 205 aa2.94□□□□□ -1.94
NBR1-205ENST00000589872 MT4P47944 62 aa2.91□□□□□ -1.94
NBR1-205ENST00000589872 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.95
NBR1-205ENST00000589872 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
NBR1-205ENST00000589872 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
NBR1-205ENST00000589872 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
NBR1-205ENST00000589872 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
NBR1-205ENST00000589872 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.99
NBR1-205ENST00000589872 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
NBR1-205ENST00000589872 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
NBR1-205ENST00000589872 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
NBR1-205ENST00000589872 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
NBR1-205ENST00000589872 LCE1FQ5T754 118 aa2.53□□□□□ -2.01
NBR1-205ENST00000589872 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
NBR1-205ENST00000589872 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
NBR1-205ENST00000589872 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
NBR1-205ENST00000589872 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
NBR1-205ENST00000589872 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
NBR1-205ENST00000589872 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
NBR1-205ENST00000589872 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
NBR1-205ENST00000589872 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
NBR1-205ENST00000589872 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
NBR1-205ENST00000589872 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
NBR1-205ENST00000589872 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms