RNA–Protein interactions for RNA: ENST00000589669.1

CCDC130-211, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-211ENST00000589669 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
CCDC130-211ENST00000589669 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
CCDC130-211ENST00000589669 SPRR2EP22531 72 aa5.27□□□□□ -1.57
CCDC130-211ENST00000589669 SPRR2BP35325 72 aa5.27□□□□□ -1.57
CCDC130-211ENST00000589669 SPRR2AP35326 72 aa5.27□□□□□ -1.57
CCDC130-211ENST00000589669 V9GYY9 64 aa5.26□□□□□ -1.57
CCDC130-211ENST00000589669 PRR15LQ9BU68 103 aa5.22□□□□□ -1.57
CCDC130-211ENST00000589669 A0A1B0GU69 56 aa5.2□□□□□ -1.58
CCDC130-211ENST00000589669 PSPHP1O15172 72 aa5.2□□□□□ -1.58
CCDC130-211ENST00000589669 KRTAP13-4Q3LI77 160 aa5.18□□□□□ -1.58
CCDC130-211ENST00000589669 SEC61GP60059 68 aa5.15□□□□□ -1.59
CCDC130-211ENST00000589669 KRTAP2-1Q9BYU5 128 aa5.11□□□□□ -1.59
CCDC130-211ENST00000589669 SPRR2DP22532 72 aa5.1□□□□□ -1.59
CCDC130-211ENST00000589669 CAMK2N1Q7Z7J9 78 aa5.09□□□□□ -1.59
CCDC130-211ENST00000589669 A0A1B0GU33 70 aa5.08□□□□□ -1.6
CCDC130-211ENST00000589669 UQCR11O14957 56 aa5.04□□□□□ -1.6
CCDC130-211ENST00000589669 A6NED7 52 aa5.02□□□□□ -1.61
CCDC130-211ENST00000589669 SPATA8Q6RVD6 105 aa5.02□□□□□ -1.61
CCDC130-211ENST00000589669 A0A0D9SG42 100 aa5□□□□□ -1.61
CCDC130-211ENST00000589669 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
CCDC130-211ENST00000589669 CDC42SE1Q9NRR8 79 aa4.97□□□□□ -1.61
CCDC130-211ENST00000589669 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
CCDC130-211ENST00000589669 SPINT4Q6UDR6 99 aa4.94□□□□□ -1.62
CCDC130-211ENST00000589669 KRTAP12-1P59990 96 aa4.93□□□□□ -1.62
CCDC130-211ENST00000589669 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
CCDC130-211ENST00000589669 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
CCDC130-211ENST00000589669 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.62
CCDC130-211ENST00000589669 MT1EP04732 61 aa4.89□□□□□ -1.63
CCDC130-211ENST00000589669 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
CCDC130-211ENST00000589669 PRO0628Q9UI54 55 aa4.8□□□□□ -1.64
CCDC130-211ENST00000589669 KRTAP19-5Q3LI72 72 aa4.79□□□□□ -1.64
CCDC130-211ENST00000589669 MT1GP13640 62 aa4.77□□□□□ -1.65
CCDC130-211ENST00000589669 TNP1P09430 55 aa4.72□□□□□ -1.65
CCDC130-211ENST00000589669 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
CCDC130-211ENST00000589669 K7ERS5 55 aa4.7□□□□□ -1.66
CCDC130-211ENST00000589669 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
CCDC130-211ENST00000589669 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
CCDC130-211ENST00000589669 MT1LQ93083 61 aa4.66□□□□□ -1.66
CCDC130-211ENST00000589669 MT1MQ8N339 61 aa4.65□□□□□ -1.67
CCDC130-211ENST00000589669 KRTAP4-4Q9BYR3 166 aa4.65□□□□□ -1.67
CCDC130-211ENST00000589669 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
CCDC130-211ENST00000589669 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
CCDC130-211ENST00000589669 ROMO1P60602 79 aa4.57□□□□□ -1.68
CCDC130-211ENST00000589669 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
CCDC130-211ENST00000589669 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
CCDC130-211ENST00000589669 KRTAP4-3Q9BYR4 195 aa4.52□□□□□ -1.69
CCDC130-211ENST00000589669 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
CCDC130-211ENST00000589669 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
CCDC130-211ENST00000589669 MT4P47944 62 aa4.45□□□□□ -1.7
CCDC130-211ENST00000589669 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
CCDC130-211ENST00000589669 KTN1-AS1Q86SY8 53 aa4.45□□□□□ -1.7
CCDC130-211ENST00000589669 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
CCDC130-211ENST00000589669 AHNAK2Q8IVF2 5795 aa4.33□□□□□ -1.72
CCDC130-211ENST00000589669 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
CCDC130-211ENST00000589669 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
CCDC130-211ENST00000589669 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
CCDC130-211ENST00000589669 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
CCDC130-211ENST00000589669 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
CCDC130-211ENST00000589669 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
CCDC130-211ENST00000589669 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
CCDC130-211ENST00000589669 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
CCDC130-211ENST00000589669 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
CCDC130-211ENST00000589669 MT1AP04731 61 aa3.97□□□□□ -1.77
CCDC130-211ENST00000589669 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
CCDC130-211ENST00000589669 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
CCDC130-211ENST00000589669 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
CCDC130-211ENST00000589669 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
CCDC130-211ENST00000589669 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
CCDC130-211ENST00000589669 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
CCDC130-211ENST00000589669 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
CCDC130-211ENST00000589669 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
CCDC130-211ENST00000589669 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
CCDC130-211ENST00000589669 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
CCDC130-211ENST00000589669 INE1O15225 51 aa2.81□□□□□ -1.96
CCDC130-211ENST00000589669 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
CCDC130-211ENST00000589669 PRM1P04553 51 aa2.39□□□□□ -2.03
CCDC130-211ENST00000589669 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
CCDC130-211ENST00000589669 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 2213.5 ms