RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 DSTQ03001 7570 aaKnown RBP6.05□□□□□ -1.44
H3F3B-208ENST00000589599 MT1LQ93083 61 aa6.02□□□□□ -1.45
H3F3B-208ENST00000589599 KRTAP25-1Q3LHN0 102 aa5.97□□□□□ -1.45
H3F3B-208ENST00000589599 MT1MQ8N339 61 aa5.97□□□□□ -1.45
H3F3B-208ENST00000589599 A6NED7 52 aa5.94□□□□□ -1.46
H3F3B-208ENST00000589599 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
H3F3B-208ENST00000589599 RPS28P62857 69 aaKnown RBP5.92□□□□□ -1.46
H3F3B-208ENST00000589599 PCP4P48539 62 aa5.9□□□□□ -1.46
H3F3B-208ENST00000589599 KRTAP4-3Q9BYR4 195 aa5.8□□□□□ -1.48
H3F3B-208ENST00000589599 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
H3F3B-208ENST00000589599 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
H3F3B-208ENST00000589599 CDC42SE1Q9NRR8 79 aa5.75□□□□□ -1.49
H3F3B-208ENST00000589599 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
H3F3B-208ENST00000589599 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
H3F3B-208ENST00000589599 GPR98Q8WXG9 6306 aa5.69□□□□□ -1.5
H3F3B-208ENST00000589599 ROMO1P60602 79 aa5.66□□□□□ -1.5
H3F3B-208ENST00000589599 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
H3F3B-208ENST00000589599 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.5
H3F3B-208ENST00000589599 HMCN1Q96RW7 5635 aa5.65□□□□□ -1.51
H3F3B-208ENST00000589599 MT4P47944 62 aa5.63□□□□□ -1.51
H3F3B-208ENST00000589599 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
H3F3B-208ENST00000589599 SVIPQ8NHG7 77 aa5.6□□□□□ -1.51
H3F3B-208ENST00000589599 KRTAP15-1Q3LI76 137 aa5.59□□□□□ -1.51
H3F3B-208ENST00000589599 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
H3F3B-208ENST00000589599 KRTAP4-6Q9BYQ5 205 aa5.47□□□□□ -1.53
H3F3B-208ENST00000589599 KRTAP5-5Q701N2 237 aaPredicted RBP5.43□□□□□ -1.54
H3F3B-208ENST00000589599 AHNAK2Q8IVF2 5795 aa5.42□□□□□ -1.54
H3F3B-208ENST00000589599 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
H3F3B-208ENST00000589599 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
H3F3B-208ENST00000589599 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
H3F3B-208ENST00000589599 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
H3F3B-208ENST00000589599 SYNE1Q8NF91 8797 aaKnown RBP5.24□□□□□ -1.57
H3F3B-208ENST00000589599 BRK1Q8WUW1 75 aa5.21□□□□□ -1.58
H3F3B-208ENST00000589599 KRTAP5-10Q6L8G5 202 aa5.18□□□□□ -1.58
H3F3B-208ENST00000589599 MT1AP04731 61 aa5.13□□□□□ -1.59
H3F3B-208ENST00000589599 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
H3F3B-208ENST00000589599 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
H3F3B-208ENST00000589599 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
H3F3B-208ENST00000589599 KRTAP5-7Q6L8G8 165 aa4.99□□□□□ -1.61
H3F3B-208ENST00000589599 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
H3F3B-208ENST00000589599 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
H3F3B-208ENST00000589599 PMAIP1Q13794 54 aa4.92□□□□□ -1.62
H3F3B-208ENST00000589599 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
H3F3B-208ENST00000589599 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
H3F3B-208ENST00000589599 MT3P25713 68 aa4.72□□□□□ -1.65
H3F3B-208ENST00000589599 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
H3F3B-208ENST00000589599 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
H3F3B-208ENST00000589599 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
H3F3B-208ENST00000589599 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
H3F3B-208ENST00000589599 AHNAKQ09666 5890 aaKnown RBP4.5□□□□□ -1.69
H3F3B-208ENST00000589599 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
H3F3B-208ENST00000589599 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
H3F3B-208ENST00000589599 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
H3F3B-208ENST00000589599 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
H3F3B-208ENST00000589599 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
H3F3B-208ENST00000589599 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
H3F3B-208ENST00000589599 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
H3F3B-208ENST00000589599 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
H3F3B-208ENST00000589599 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
H3F3B-208ENST00000589599 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
H3F3B-208ENST00000589599 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
H3F3B-208ENST00000589599 H3BS24 57 aa3.91□□□□□ -1.78
H3F3B-208ENST00000589599 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
H3F3B-208ENST00000589599 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
H3F3B-208ENST00000589599 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
H3F3B-208ENST00000589599 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
H3F3B-208ENST00000589599 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
H3F3B-208ENST00000589599 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
H3F3B-208ENST00000589599 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
H3F3B-208ENST00000589599 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
H3F3B-208ENST00000589599 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
H3F3B-208ENST00000589599 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
H3F3B-208ENST00000589599 PRM1P04553 51 aa2.88□□□□□ -1.95
H3F3B-208ENST00000589599 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
H3F3B-208ENST00000589599 INE1O15225 51 aa2.75□□□□□ -1.97
H3F3B-208ENST00000589599 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
H3F3B-208ENST00000589599 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms