RNA–Protein interactions for RNA: ENST00000589536.5

GRN-215, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-215ENST00000589536 ANAPC13Q9BS18 74 aa8.39□□□□□ -1.07
GRN-215ENST00000589536 PRR15LQ9BU68 103 aa8.32□□□□□ -1.08
GRN-215ENST00000589536 AHNAK2Q8IVF2 5795 aa8.31□□□□□ -1.08
GRN-215ENST00000589536 KRTAP4-6Q9BYQ5 205 aa8.31□□□□□ -1.08
GRN-215ENST00000589536 CCDC179H3BU77 68 aa8.27□□□□□ -1.09
GRN-215ENST00000589536 KRTAP12-3P60328 96 aa8.26□□□□□ -1.09
GRN-215ENST00000589536 KRTAP4-7Q9BYR0 210 aa8.26□□□□□ -1.09
GRN-215ENST00000589536 ATP5EP56381 51 aaPredicted RBP8.24□□□□□ -1.09
GRN-215ENST00000589536 LINC01558Q9Y6Z2 57 aa8.23□□□□□ -1.09
GRN-215ENST00000589536 KRTAP5-10Q6L8G5 202 aa8.2□□□□□ -1.1
GRN-215ENST00000589536 UQCR11O14957 56 aa8.06□□□□□ -1.12
GRN-215ENST00000589536 KRTAP5-5Q701N2 237 aaPredicted RBP8.05□□□□□ -1.12
GRN-215ENST00000589536 PCP4P48539 62 aa8.02□□□□□ -1.13
GRN-215ENST00000589536 KRTAP20-2Q3LI61 65 aa7.98□□□□□ -1.13
GRN-215ENST00000589536 KRTAP25-1Q3LHN0 102 aa7.95□□□□□ -1.14
GRN-215ENST00000589536 KRTAP5-3Q6L8H2 238 aa7.95□□□□□ -1.14
GRN-215ENST00000589536 TMEM258P61165 79 aa7.93□□□□□ -1.14
GRN-215ENST00000589536 SPRR5A0A1B0GTR4 108 aa7.91□□□□□ -1.14
GRN-215ENST00000589536 KRTAP5-7Q6L8G8 165 aa7.9□□□□□ -1.14
GRN-215ENST00000589536 MIR22HGQ0VDD5 57 aa7.86□□□□□ -1.15
GRN-215ENST00000589536 LOC100996750A0A140TA64 210 aa7.84□□□□□ -1.15
GRN-215ENST00000589536 KRTAP12-4P60329 112 aa7.82□□□□□ -1.16
GRN-215ENST00000589536 KRTAP19-4Q3LI73 84 aa7.76□□□□□ -1.17
GRN-215ENST00000589536 K7ERS5 55 aa7.72□□□□□ -1.17
GRN-215ENST00000589536 SYNE1Q8NF91 8797 aaKnown RBP7.71□□□□□ -1.18
GRN-215ENST00000589536 KRTAP23-1A1A580 65 aa7.65□□□□□ -1.18
GRN-215ENST00000589536 KRTAP15-1Q3LI76 137 aa7.64□□□□□ -1.19
GRN-215ENST00000589536 PSPHP1O15172 72 aa7.58□□□□□ -1.2
GRN-215ENST00000589536 LCE3CQ5T5A8 94 aa7.58□□□□□ -1.2
GRN-215ENST00000589536 V9GYY9 64 aa7.53□□□□□ -1.2
GRN-215ENST00000589536 Q1T7F1 81 aa7.5□□□□□ -1.21
GRN-215ENST00000589536 MT1AP04731 61 aa7.39□□□□□ -1.23
GRN-215ENST00000589536 KRTAP5-2Q701N4 177 aa7.38□□□□□ -1.23
GRN-215ENST00000589536 KRTAP6-1Q3LI64 71 aa7.37□□□□□ -1.23
GRN-215ENST00000589536 RPS28P62857 69 aaKnown RBP7.35□□□□□ -1.23
GRN-215ENST00000589536 KRTAP4-11Q9BYQ6 195 aa7.33□□□□□ -1.24
GRN-215ENST00000589536 CDC42SE1Q9NRR8 79 aa7.31□□□□□ -1.24
GRN-215ENST00000589536 A6NED7 52 aa7.29□□□□□ -1.24
GRN-215ENST00000589536 KRTAP9-6A8MVA2 160 aa7.2□□□□□ -1.26
GRN-215ENST00000589536 ROMO1P60602 79 aa7.18□□□□□ -1.26
GRN-215ENST00000589536 KRTAP9-4Q9BYQ2 154 aa7.16□□□□□ -1.26
GRN-215ENST00000589536 KRTAP5-8O75690 187 aa7.11□□□□□ -1.27
GRN-215ENST00000589536 KRTAP6-2Q3LI66 62 aa7.08□□□□□ -1.28
GRN-215ENST00000589536 MUC5ACP98088 5654 aa6.87□□□□□ -1.31
GRN-215ENST00000589536 OBSCNQ5VST9 7968 aa6.87□□□□□ -1.31
GRN-215ENST00000589536 MUC5BQ9HC84 5762 aaPredicted RBP6.85□□□□□ -1.31
GRN-215ENST00000589536 AHNAKQ09666 5890 aaKnown RBP6.84□□□□□ -1.31
GRN-215ENST00000589536 MT3P25713 68 aa6.75□□□□□ -1.33
GRN-215ENST00000589536 KRTAP9-9Q9BYP9 154 aa6.74□□□□□ -1.33
GRN-215ENST00000589536 BRK1Q8WUW1 75 aa6.69□□□□□ -1.34
GRN-215ENST00000589536 KRTAP5-1Q6L8H4 278 aa6.65□□□□□ -1.34
GRN-215ENST00000589536 PRO0628Q9UI54 55 aa6.41□□□□□ -1.38
GRN-215ENST00000589536 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
GRN-215ENST00000589536 LCE1EQ5T753 118 aa6.27□□□□□ -1.41
GRN-215ENST00000589536 KTN1-AS1Q86SY8 53 aa5.99□□□□□ -1.45
GRN-215ENST00000589536 KRTAP4-2Q9BYR5 136 aa5.97□□□□□ -1.45
GRN-215ENST00000589536 LCE1BQ5T7P3 118 aa5.9□□□□□ -1.46
GRN-215ENST00000589536 PRAC1Q96KF2 57 aa5.9□□□□□ -1.46
GRN-215ENST00000589536 LCE1CQ5T751 118 aa5.83□□□□□ -1.48
GRN-215ENST00000589536 SVIPQ8NHG7 77 aa5.74□□□□□ -1.49
GRN-215ENST00000589536 KRTAP4-12Q9BQ66 201 aa5.45□□□□□ -1.54
GRN-215ENST00000589536 LCE3DQ9BYE3 92 aa5.4□□□□□ -1.54
GRN-215ENST00000589536 KRTAP5-11Q6L8G4 156 aa5.31□□□□□ -1.56
GRN-215ENST00000589536 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.29□□□□□ -1.56
GRN-215ENST00000589536 LCE1FQ5T754 118 aa5.2□□□□□ -1.58
GRN-215ENST00000589536 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
GRN-215ENST00000589536 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
GRN-215ENST00000589536 KRTAP21-2Q3LI59 83 aa4.87□□□□□ -1.63
GRN-215ENST00000589536 PHGR1C9JFL3 82 aa4.76□□□□□ -1.65
GRN-215ENST00000589536 NDUFAF8A1L188 74 aa4.62□□□□□ -1.67
GRN-215ENST00000589536 KRTAP4-4Q9BYR3 166 aa4.47□□□□□ -1.69
GRN-215ENST00000589536 MUC19Q7Z5P9 8384 aa4.24□□□□□ -1.73
GRN-215ENST00000589536 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
GRN-215ENST00000589536 H3BS24 57 aa3.82□□□□□ -1.8
GRN-215ENST00000589536 INE1O15225 51 aa3.82□□□□□ -1.8
GRN-215ENST00000589536 PRM1P04553 51 aa3.67□□□□□ -1.82
GRN-215ENST00000589536 KRTAP21-1Q3LI58 79 aa3.62□□□□□ -1.83
GRN-215ENST00000589536 MUC16Q8WXI7 14507 aa3.03□□□□□ -1.92
Retrieved 78 of 20,778 RNA–protein pairs in 7.5 ms