RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
DNMT1-218ENST00000589294 KRTAP12-3P60328 96 aa4.43□□□□□ -1.7
DNMT1-218ENST00000589294 KRTAP19-3Q7Z4W3 81 aa4.38□□□□□ -1.71
DNMT1-218ENST00000589294 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
DNMT1-218ENST00000589294 MT1GP13640 62 aa4.35□□□□□ -1.71
DNMT1-218ENST00000589294 MT1LQ93083 61 aa4.34□□□□□ -1.71
DNMT1-218ENST00000589294 SPRR2DP22532 72 aa4.32□□□□□ -1.72
DNMT1-218ENST00000589294 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
DNMT1-218ENST00000589294 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
DNMT1-218ENST00000589294 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
DNMT1-218ENST00000589294 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
DNMT1-218ENST00000589294 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
DNMT1-218ENST00000589294 MT1MQ8N339 61 aa4.24□□□□□ -1.73
DNMT1-218ENST00000589294 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
DNMT1-218ENST00000589294 LCE3BQ5TA77 95 aa4.18□□□□□ -1.74
DNMT1-218ENST00000589294 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.75
DNMT1-218ENST00000589294 KRTAP2-1Q9BYU5 128 aa4.15□□□□□ -1.75
DNMT1-218ENST00000589294 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
DNMT1-218ENST00000589294 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
DNMT1-218ENST00000589294 KTN1-AS1Q86SY8 53 aa4.13□□□□□ -1.75
DNMT1-218ENST00000589294 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
DNMT1-218ENST00000589294 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
DNMT1-218ENST00000589294 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
DNMT1-218ENST00000589294 SVIPQ8NHG7 77 aa3.88□□□□□ -1.79
DNMT1-218ENST00000589294 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
DNMT1-218ENST00000589294 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
DNMT1-218ENST00000589294 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
DNMT1-218ENST00000589294 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
DNMT1-218ENST00000589294 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
DNMT1-218ENST00000589294 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
DNMT1-218ENST00000589294 MT4P47944 62 aa3.74□□□□□ -1.81
DNMT1-218ENST00000589294 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
DNMT1-218ENST00000589294 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
DNMT1-218ENST00000589294 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
DNMT1-218ENST00000589294 MT1AP04731 61 aa3.7□□□□□ -1.82
DNMT1-218ENST00000589294 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
DNMT1-218ENST00000589294 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
DNMT1-218ENST00000589294 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
DNMT1-218ENST00000589294 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
DNMT1-218ENST00000589294 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
DNMT1-218ENST00000589294 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
DNMT1-218ENST00000589294 KRTAP5-3Q6L8H2 238 aa3.49□□□□□ -1.85
DNMT1-218ENST00000589294 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
DNMT1-218ENST00000589294 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
DNMT1-218ENST00000589294 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
DNMT1-218ENST00000589294 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
DNMT1-218ENST00000589294 MT3P25713 68 aa3.4□□□□□ -1.87
DNMT1-218ENST00000589294 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
DNMT1-218ENST00000589294 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
DNMT1-218ENST00000589294 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
DNMT1-218ENST00000589294 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
DNMT1-218ENST00000589294 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
DNMT1-218ENST00000589294 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
DNMT1-218ENST00000589294 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
DNMT1-218ENST00000589294 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
DNMT1-218ENST00000589294 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
DNMT1-218ENST00000589294 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
DNMT1-218ENST00000589294 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
DNMT1-218ENST00000589294 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
DNMT1-218ENST00000589294 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
DNMT1-218ENST00000589294 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
DNMT1-218ENST00000589294 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
DNMT1-218ENST00000589294 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
DNMT1-218ENST00000589294 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
DNMT1-218ENST00000589294 A0A0A0MQY5 61 aa2.7□□□□□ -1.98
DNMT1-218ENST00000589294 INE1O15225 51 aa2.63□□□□□ -1.99
DNMT1-218ENST00000589294 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
DNMT1-218ENST00000589294 H3BS24 57 aa2.56□□□□□ -2
DNMT1-218ENST00000589294 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
DNMT1-218ENST00000589294 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
DNMT1-218ENST00000589294 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
DNMT1-218ENST00000589294 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
DNMT1-218ENST00000589294 PRM1P04553 51 aa2.37□□□□□ -2.03
DNMT1-218ENST00000589294 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
DNMT1-218ENST00000589294 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
DNMT1-218ENST00000589294 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
DNMT1-218ENST00000589294 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
DNMT1-218ENST00000589294 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 87.2 ms