RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 KRTAP6-3Q3LI67 103 aa9.17□□□□□ -0.94
RFX1-205ENST00000589239 MUC12Q9UKN1 5478 aa9.15□□□□□ -0.95
RFX1-205ENST00000589239 KRTAP9-7A8MTY7 169 aa9.14□□□□□ -0.95
RFX1-205ENST00000589239 KRTAP12-3P60328 96 aa9.13□□□□□ -0.95
RFX1-205ENST00000589239 MT1EP04732 61 aa9.07□□□□□ -0.96
RFX1-205ENST00000589239 MDN1Q9NU22 5596 aa9.03□□□□□ -0.96
RFX1-205ENST00000589239 INE1O15225 51 aa9.01□□□□□ -0.97
RFX1-205ENST00000589239 MT1LQ93083 61 aa8.83□□□□□ -1
RFX1-205ENST00000589239 LCE1AQ5T7P2 110 aa8.82□□□□□ -1
RFX1-205ENST00000589239 SPRR2EP22531 72 aa8.8□□□□□ -1
RFX1-205ENST00000589239 SPRR2BP35325 72 aa8.8□□□□□ -1
RFX1-205ENST00000589239 SPRR2AP35326 72 aa8.8□□□□□ -1
RFX1-205ENST00000589239 KRTAP19-3Q7Z4W3 81 aa8.79□□□□□ -1
RFX1-205ENST00000589239 NEBP20929 6669 aa8.69□□□□□ -1.02
RFX1-205ENST00000589239 LCE5AQ5TCM9 118 aa8.68□□□□□ -1.02
RFX1-205ENST00000589239 MT1GP13640 62 aa8.66□□□□□ -1.02
RFX1-205ENST00000589239 MT1MQ8N339 61 aa8.57□□□□□ -1.04
RFX1-205ENST00000589239 KRTAP4-7Q9BYR0 210 aa8.55□□□□□ -1.04
RFX1-205ENST00000589239 KRTAP19-4Q3LI73 84 aa8.49□□□□□ -1.05
RFX1-205ENST00000589239 LCE3CQ5T5A8 94 aa8.49□□□□□ -1.05
RFX1-205ENST00000589239 SPRR2DP22532 72 aa8.48□□□□□ -1.05
RFX1-205ENST00000589239 KRTAP4-3Q9BYR4 195 aa8.42□□□□□ -1.06
RFX1-205ENST00000589239 DSTQ03001 7570 aaKnown RBP8.4□□□□□ -1.06
RFX1-205ENST00000589239 LCE3BQ5TA77 95 aa8.18□□□□□ -1.1
RFX1-205ENST00000589239 KRTAP2-3P0C7H8 128 aa8.09□□□□□ -1.11
RFX1-205ENST00000589239 KRTAP2-4Q9BYR9 128 aa8.09□□□□□ -1.11
RFX1-205ENST00000589239 KRTAP20-1Q3LI63 56 aa8.06□□□□□ -1.12
RFX1-205ENST00000589239 KRTAP9-6A8MVA2 160 aa8.06□□□□□ -1.12
RFX1-205ENST00000589239 LOC100996750A0A140TA64 210 aa8.05□□□□□ -1.12
RFX1-205ENST00000589239 KRTAP2-2Q9BYT5 123 aa7.91□□□□□ -1.14
RFX1-205ENST00000589239 KRTAP2-1Q9BYU5 128 aa7.91□□□□□ -1.14
RFX1-205ENST00000589239 KRTAP5-5Q701N2 237 aaPredicted RBP7.76□□□□□ -1.17
RFX1-205ENST00000589239 KRTAP5-4Q6L8H1 288 aa7.57□□□□□ -1.2
RFX1-205ENST00000589239 LCE4AQ5TA78 99 aa7.49□□□□□ -1.21
RFX1-205ENST00000589239 MT1AP04731 61 aa7.49□□□□□ -1.21
RFX1-205ENST00000589239 KRTAP6-1Q3LI64 71 aa7.46□□□□□ -1.22
RFX1-205ENST00000589239 KRTAP4-9Q9BYQ8 210 aa7.44□□□□□ -1.22
RFX1-205ENST00000589239 SYNE1Q8NF91 8797 aaKnown RBP7.43□□□□□ -1.22
RFX1-205ENST00000589239 MT4P47944 62 aa7.41□□□□□ -1.22
RFX1-205ENST00000589239 LCE1DQ5T752 114 aa7.33□□□□□ -1.24
RFX1-205ENST00000589239 KRTAP4-6Q9BYQ5 205 aa7.31□□□□□ -1.24
RFX1-205ENST00000589239 KRTAP12-4P60329 112 aa7.28□□□□□ -1.24
RFX1-205ENST00000589239 HMCN1Q96RW7 5635 aa7.27□□□□□ -1.25
RFX1-205ENST00000589239 KRTAP9-4Q9BYQ2 154 aa7.15□□□□□ -1.26
RFX1-205ENST00000589239 KRTAP20-2Q3LI61 65 aa7.12□□□□□ -1.27
RFX1-205ENST00000589239 KRTAP6-2Q3LI66 62 aa6.94□□□□□ -1.3
RFX1-205ENST00000589239 KRTAP5-3Q6L8H2 238 aa6.86□□□□□ -1.31
RFX1-205ENST00000589239 MT3P25713 68 aa6.8□□□□□ -1.32
RFX1-205ENST00000589239 KRTAP5-2Q701N4 177 aa6.8□□□□□ -1.32
RFX1-205ENST00000589239 AHNAK2Q8IVF2 5795 aa6.57□□□□□ -1.36
RFX1-205ENST00000589239 OBSCNQ5VST9 7968 aa6.53□□□□□ -1.36
RFX1-205ENST00000589239 LCE3DQ9BYE3 92 aa6.37□□□□□ -1.39
RFX1-205ENST00000589239 LCE3EQ5T5B0 92 aa6.35□□□□□ -1.39
RFX1-205ENST00000589239 KRTAP5-10Q6L8G5 202 aa6.29□□□□□ -1.4
RFX1-205ENST00000589239 PRM1P04553 51 aa6.28□□□□□ -1.4
RFX1-205ENST00000589239 GPR98Q8WXG9 6306 aa6.26□□□□□ -1.41
RFX1-205ENST00000589239 KRTAP4-11Q9BYQ6 195 aa6.26□□□□□ -1.41
RFX1-205ENST00000589239 KRTAP5-8O75690 187 aa6.03□□□□□ -1.44
RFX1-205ENST00000589239 LCE1EQ5T753 118 aa5.98□□□□□ -1.45
RFX1-205ENST00000589239 KRTAP5-1Q6L8H4 278 aa5.96□□□□□ -1.46
RFX1-205ENST00000589239 KRTAP5-7Q6L8G8 165 aa5.86□□□□□ -1.47
RFX1-205ENST00000589239 MUC5ACP98088 5654 aa5.79□□□□□ -1.48
RFX1-205ENST00000589239 LCE1BQ5T7P3 118 aa5.66□□□□□ -1.5
RFX1-205ENST00000589239 KRTAP4-2Q9BYR5 136 aa5.63□□□□□ -1.51
RFX1-205ENST00000589239 LCE1CQ5T751 118 aa5.58□□□□□ -1.52
RFX1-205ENST00000589239 KRTAP9-9Q9BYP9 154 aa5.51□□□□□ -1.53
RFX1-205ENST00000589239 MUC5BQ9HC84 5762 aaPredicted RBP5.34□□□□□ -1.56
RFX1-205ENST00000589239 KRTAP4-12Q9BQ66 201 aa5.25□□□□□ -1.57
RFX1-205ENST00000589239 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.18□□□□□ -1.58
RFX1-205ENST00000589239 AHNAKQ09666 5890 aaKnown RBP5.07□□□□□ -1.6
RFX1-205ENST00000589239 KRTAP5-11Q6L8G4 156 aa4.96□□□□□ -1.62
RFX1-205ENST00000589239 KRTAP21-2Q3LI59 83 aa4.89□□□□□ -1.63
RFX1-205ENST00000589239 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
RFX1-205ENST00000589239 KRTAP4-4Q9BYR3 166 aa4.4□□□□□ -1.7
RFX1-205ENST00000589239 PHGR1C9JFL3 82 aa4.27□□□□□ -1.73
RFX1-205ENST00000589239 KRTAP21-1Q3LI58 79 aa4.06□□□□□ -1.76
RFX1-205ENST00000589239 MUC19Q7Z5P9 8384 aa3.92□□□□□ -1.78
RFX1-205ENST00000589239 MUC16Q8WXI7 14507 aa2.65□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 57.3 ms