RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, humanhuman

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-206ENST00000589055 MT1MQ8N339 61 aa5.69□□□□□ -1.5
TMEM259-206ENST00000589055 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
TMEM259-206ENST00000589055 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
TMEM259-206ENST00000589055 KRTAP5-3Q6L8H2 238 aa5.64□□□□□ -1.51
TMEM259-206ENST00000589055 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
TMEM259-206ENST00000589055 TNP1P09430 55 aa5.61□□□□□ -1.51
TMEM259-206ENST00000589055 PCP4P48539 62 aa5.6□□□□□ -1.51
TMEM259-206ENST00000589055 PRR15LQ9BU68 103 aa5.55□□□□□ -1.52
TMEM259-206ENST00000589055 ATP5EP56381 51 aaPredicted RBP5.54□□□□□ -1.52
TMEM259-206ENST00000589055 LINC01558Q9Y6Z2 57 aa5.53□□□□□ -1.52
TMEM259-206ENST00000589055 KRTAP4-6Q9BYQ5 205 aa5.5□□□□□ -1.53
TMEM259-206ENST00000589055 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
TMEM259-206ENST00000589055 KRTAP5-4Q6L8H1 288 aa5.45□□□□□ -1.54
TMEM259-206ENST00000589055 TMEM258P61165 79 aa5.44□□□□□ -1.54
TMEM259-206ENST00000589055 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
TMEM259-206ENST00000589055 UQCR11O14957 56 aa5.39□□□□□ -1.55
TMEM259-206ENST00000589055 MIR22HGQ0VDD5 57 aa5.29□□□□□ -1.56
TMEM259-206ENST00000589055 AHNAKQ09666 5890 aaKnown RBP5.29□□□□□ -1.56
TMEM259-206ENST00000589055 KRTAP25-1Q3LHN0 102 aa5.25□□□□□ -1.57
TMEM259-206ENST00000589055 KRTAP20-2Q3LI61 65 aa5.22□□□□□ -1.57
TMEM259-206ENST00000589055 KRTAP5-5Q701N2 237 aaPredicted RBP5.22□□□□□ -1.57
TMEM259-206ENST00000589055 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
TMEM259-206ENST00000589055 PSPHP1O15172 72 aa5.19□□□□□ -1.58
TMEM259-206ENST00000589055 MUC5ACP98088 5654 aa5.19□□□□□ -1.58
TMEM259-206ENST00000589055 RPS28P62857 69 aaKnown RBP5.16□□□□□ -1.58
TMEM259-206ENST00000589055 K7ERS5 55 aa5.14□□□□□ -1.59
TMEM259-206ENST00000589055 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
TMEM259-206ENST00000589055 Q1T7F1 81 aa5.07□□□□□ -1.6
TMEM259-206ENST00000589055 V9GYY9 64 aa5.07□□□□□ -1.6
TMEM259-206ENST00000589055 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
TMEM259-206ENST00000589055 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
TMEM259-206ENST00000589055 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
TMEM259-206ENST00000589055 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
TMEM259-206ENST00000589055 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
TMEM259-206ENST00000589055 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
TMEM259-206ENST00000589055 A6NED7 52 aa4.96□□□□□ -1.62
TMEM259-206ENST00000589055 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.62
TMEM259-206ENST00000589055 CDC42SE1Q9NRR8 79 aa4.9□□□□□ -1.63
TMEM259-206ENST00000589055 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
TMEM259-206ENST00000589055 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.63
TMEM259-206ENST00000589055 MT1AP04731 61 aa4.83□□□□□ -1.64
TMEM259-206ENST00000589055 ROMO1P60602 79 aa4.83□□□□□ -1.64
TMEM259-206ENST00000589055 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
TMEM259-206ENST00000589055 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
TMEM259-206ENST00000589055 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
TMEM259-206ENST00000589055 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
TMEM259-206ENST00000589055 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
TMEM259-206ENST00000589055 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
TMEM259-206ENST00000589055 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
TMEM259-206ENST00000589055 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
TMEM259-206ENST00000589055 MT3P25713 68 aa4.38□□□□□ -1.71
TMEM259-206ENST00000589055 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
TMEM259-206ENST00000589055 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
TMEM259-206ENST00000589055 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
TMEM259-206ENST00000589055 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
TMEM259-206ENST00000589055 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
TMEM259-206ENST00000589055 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
TMEM259-206ENST00000589055 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
TMEM259-206ENST00000589055 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
TMEM259-206ENST00000589055 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
TMEM259-206ENST00000589055 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
TMEM259-206ENST00000589055 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
TMEM259-206ENST00000589055 PHGR1C9JFL3 82 aa3.55□□□□□ -1.84
TMEM259-206ENST00000589055 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
TMEM259-206ENST00000589055 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
TMEM259-206ENST00000589055 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
TMEM259-206ENST00000589055 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
TMEM259-206ENST00000589055 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
TMEM259-206ENST00000589055 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
TMEM259-206ENST00000589055 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
TMEM259-206ENST00000589055 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
TMEM259-206ENST00000589055 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
TMEM259-206ENST00000589055 A0A0A0MQY5 61 aa2.77□□□□□ -1.97
TMEM259-206ENST00000589055 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
TMEM259-206ENST00000589055 INE1O15225 51 aa2.63□□□□□ -1.99
TMEM259-206ENST00000589055 H3BS24 57 aa2.52□□□□□ -2.01
TMEM259-206ENST00000589055 PRM1P04553 51 aa2.51□□□□□ -2.01
TMEM259-206ENST00000589055 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 293.1 ms