RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 KRTAP20-1Q3LI63 56 aa5.24□□□□□ -1.57
CNN1-208ENST00000588935 MT1LQ93083 61 aa5.21□□□□□ -1.58
CNN1-208ENST00000588935 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
CNN1-208ENST00000588935 LCE5AQ5TCM9 118 aa5.2□□□□□ -1.58
CNN1-208ENST00000588935 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
CNN1-208ENST00000588935 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
CNN1-208ENST00000588935 MT1GP13640 62 aa5.17□□□□□ -1.58
CNN1-208ENST00000588935 PMAIP1Q13794 54 aa5.12□□□□□ -1.59
CNN1-208ENST00000588935 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
CNN1-208ENST00000588935 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
CNN1-208ENST00000588935 MT1MQ8N339 61 aa5.11□□□□□ -1.59
CNN1-208ENST00000588935 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
CNN1-208ENST00000588935 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
CNN1-208ENST00000588935 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
CNN1-208ENST00000588935 KRTAP2-2Q9BYT5 123 aa5.04□□□□□ -1.6
CNN1-208ENST00000588935 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
CNN1-208ENST00000588935 PRO0628Q9UI54 55 aa5□□□□□ -1.61
CNN1-208ENST00000588935 DSTQ03001 7570 aaKnown RBP4.91□□□□□ -1.62
CNN1-208ENST00000588935 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
CNN1-208ENST00000588935 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
CNN1-208ENST00000588935 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
CNN1-208ENST00000588935 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
CNN1-208ENST00000588935 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
CNN1-208ENST00000588935 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
CNN1-208ENST00000588935 KTN1-AS1Q86SY8 53 aa4.7□□□□□ -1.66
CNN1-208ENST00000588935 MT4P47944 62 aa4.65□□□□□ -1.67
CNN1-208ENST00000588935 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
CNN1-208ENST00000588935 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
CNN1-208ENST00000588935 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
CNN1-208ENST00000588935 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
CNN1-208ENST00000588935 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
CNN1-208ENST00000588935 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
CNN1-208ENST00000588935 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
CNN1-208ENST00000588935 MT1AP04731 61 aa4.43□□□□□ -1.7
CNN1-208ENST00000588935 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
CNN1-208ENST00000588935 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.71
CNN1-208ENST00000588935 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
CNN1-208ENST00000588935 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
CNN1-208ENST00000588935 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
CNN1-208ENST00000588935 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
CNN1-208ENST00000588935 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
CNN1-208ENST00000588935 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
CNN1-208ENST00000588935 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
CNN1-208ENST00000588935 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
CNN1-208ENST00000588935 KRTAP5-2Q701N4 177 aa4.09□□□□□ -1.75
CNN1-208ENST00000588935 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
CNN1-208ENST00000588935 MT3P25713 68 aa4.04□□□□□ -1.76
CNN1-208ENST00000588935 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
CNN1-208ENST00000588935 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
CNN1-208ENST00000588935 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
CNN1-208ENST00000588935 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
CNN1-208ENST00000588935 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
CNN1-208ENST00000588935 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
CNN1-208ENST00000588935 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
CNN1-208ENST00000588935 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
CNN1-208ENST00000588935 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
CNN1-208ENST00000588935 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
CNN1-208ENST00000588935 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
CNN1-208ENST00000588935 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
CNN1-208ENST00000588935 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
CNN1-208ENST00000588935 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
CNN1-208ENST00000588935 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
CNN1-208ENST00000588935 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
CNN1-208ENST00000588935 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
CNN1-208ENST00000588935 H3BS24 57 aa3.28□□□□□ -1.88
CNN1-208ENST00000588935 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
CNN1-208ENST00000588935 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
CNN1-208ENST00000588935 A0A0A0MQY5 61 aa3.02□□□□□ -1.93
CNN1-208ENST00000588935 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
CNN1-208ENST00000588935 INE1O15225 51 aa2.89□□□□□ -1.95
CNN1-208ENST00000588935 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
CNN1-208ENST00000588935 PRM1P04553 51 aa2.82□□□□□ -1.96
CNN1-208ENST00000588935 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
CNN1-208ENST00000588935 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
CNN1-208ENST00000588935 PHGR1C9JFL3 82 aa2.56□□□□□ -2
CNN1-208ENST00000588935 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
CNN1-208ENST00000588935 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
CNN1-208ENST00000588935 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 42 ms