RNA–Protein interactions for RNA: ENST00000588892.1

U2AF1L4-210, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 2

Gene U2AF1L4, Length 2,582 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-210	ENST00000588892	KRTAP19-7	Q3SYF9	63 aa		4.04	□□□□□ -1.76
U2AF1L4-210	ENST00000588892	KRTAP9-6	A8MVA2	160 aa		4.03	□□□□□ -1.76
U2AF1L4-210	ENST00000588892	KRTAP4-7	Q9BYR0	210 aa		3.96	□□□□□ -1.78
U2AF1L4-210	ENST00000588892	LOC100996750	A0A140TA64	210 aa		3.94	□□□□□ -1.78
U2AF1L4-210	ENST00000588892	KRTAP4-6	Q9BYQ5	205 aa		3.94	□□□□□ -1.78
U2AF1L4-210	ENST00000588892	MT1E	P04732	61 aa		3.93	□□□□□ -1.78
U2AF1L4-210	ENST00000588892	KRTAP9-7	A8MTY7	169 aa		3.87	□□□□□ -1.79
U2AF1L4-210	ENST00000588892	KRTAP2-3	P0C7H8	128 aa		3.87	□□□□□ -1.79
U2AF1L4-210	ENST00000588892	KRTAP2-4	Q9BYR9	128 aa		3.87	□□□□□ -1.79
U2AF1L4-210	ENST00000588892	KRTAP2-1	Q9BYU5	128 aa		3.87	□□□□□ -1.79
U2AF1L4-210	ENST00000588892	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.86	□□□□□ -1.79
U2AF1L4-210	ENST00000588892	MT1L	Q93083	61 aa		3.86	□□□□□ -1.79
U2AF1L4-210	ENST00000588892	MDN1	Q9NU22	5596 aa		3.86	□□□□□ -1.79
U2AF1L4-210	ENST00000588892	SPRR2F	Q96RM1	72 aa		3.85	□□□□□ -1.79
U2AF1L4-210	ENST00000588892	DST	Q03001	7570 aa	Known RBP	3.82	□□□□□ -1.8
U2AF1L4-210	ENST00000588892	KRTAP4-3	Q9BYR4	195 aa		3.77	□□□□□ -1.81
U2AF1L4-210	ENST00000588892	KRTAP19-3	Q7Z4W3	81 aa		3.75	□□□□□ -1.81
U2AF1L4-210	ENST00000588892	KRTAP5-9	P26371	169 aa		3.72	□□□□□ -1.81
U2AF1L4-210	ENST00000588892	MT1M	Q8N339	61 aa		3.7	□□□□□ -1.82
U2AF1L4-210	ENST00000588892	LCE5A	Q5TCM9	118 aa		3.69	□□□□□ -1.82
U2AF1L4-210	ENST00000588892	MT1G	P13640	62 aa		3.67	□□□□□ -1.82
U2AF1L4-210	ENST00000588892	LCE1A	Q5T7P2	110 aa		3.66	□□□□□ -1.82
U2AF1L4-210	ENST00000588892	SPRR2E	P22531	72 aa		3.62	□□□□□ -1.83
U2AF1L4-210	ENST00000588892	SPRR2B	P35325	72 aa		3.62	□□□□□ -1.83
U2AF1L4-210	ENST00000588892	SPRR2A	P35326	72 aa		3.62	□□□□□ -1.83
U2AF1L4-210	ENST00000588892	KRTAP6-3	Q3LI67	103 aa		3.61	□□□□□ -1.83
U2AF1L4-210	ENST00000588892	KRTAP19-4	Q3LI73	84 aa		3.59	□□□□□ -1.83
U2AF1L4-210	ENST00000588892	KRTAP4-12	Q9BQ66	201 aa		3.58	□□□□□ -1.84
U2AF1L4-210	ENST00000588892	KRTAP12-4	P60329	112 aa		3.56	□□□□□ -1.84
U2AF1L4-210	ENST00000588892	LCE3B	Q5TA77	95 aa		3.54	□□□□□ -1.84
U2AF1L4-210	ENST00000588892	LCE4A	Q5TA78	99 aa		3.52	□□□□□ -1.85
U2AF1L4-210	ENST00000588892	KRTAP9-9	Q9BYP9	154 aa		3.51	□□□□□ -1.85
U2AF1L4-210	ENST00000588892	KRTAP9-4	Q9BYQ2	154 aa		3.51	□□□□□ -1.85
U2AF1L4-210	ENST00000588892	NEB	P20929	6669 aa		3.5	□□□□□ -1.85
U2AF1L4-210	ENST00000588892	SPRR2D	P22532	72 aa		3.47	□□□□□ -1.85
U2AF1L4-210	ENST00000588892	SYNE1	Q8NF91	8797 aa	Known RBP	3.44	□□□□□ -1.86
U2AF1L4-210	ENST00000588892	KRTAP4-9	Q9BYQ8	210 aa		3.42	□□□□□ -1.86
U2AF1L4-210	ENST00000588892	KRTAP20-1	Q3LI63	56 aa		3.39	□□□□□ -1.87
U2AF1L4-210	ENST00000588892	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.33	□□□□□ -1.88
U2AF1L4-210	ENST00000588892	KRTAP6-1	Q3LI64	71 aa		3.3	□□□□□ -1.88
U2AF1L4-210	ENST00000588892	LCE1D	Q5T752	114 aa		3.27	□□□□□ -1.89
U2AF1L4-210	ENST00000588892	OBSCN	Q5VST9	7968 aa		3.25	□□□□□ -1.89
U2AF1L4-210	ENST00000588892	MT1A	P04731	61 aa		3.22	□□□□□ -1.89
U2AF1L4-210	ENST00000588892	PRM1	P04553	51 aa		3.19	□□□□□ -1.9
U2AF1L4-210	ENST00000588892	LCE3D	Q9BYE3	92 aa		3.18	□□□□□ -1.9
U2AF1L4-210	ENST00000588892	LCE3E	Q5T5B0	92 aa		3.15	□□□□□ -1.91
U2AF1L4-210	ENST00000588892	KRTAP4-2	Q9BYR5	136 aa		3.13	□□□□□ -1.91
U2AF1L4-210	ENST00000588892	KRTAP5-4	Q6L8H1	288 aa		3.12	□□□□□ -1.91
U2AF1L4-210	ENST00000588892	KRTAP2-2	Q9BYT5	123 aa		3.11	□□□□□ -1.91
U2AF1L4-210	ENST00000588892	MT4	P47944	62 aa		3.09	□□□□□ -1.91
U2AF1L4-210	ENST00000588892	KRTAP4-11	Q9BYQ6	195 aa		3.09	□□□□□ -1.91
U2AF1L4-210	ENST00000588892	HMCN1	Q96RW7	5635 aa		3.03	□□□□□ -1.92
U2AF1L4-210	ENST00000588892	KRTAP6-2	Q3LI66	62 aa		3.03	□□□□□ -1.93
U2AF1L4-210	ENST00000588892	GPR98	Q8WXG9	6306 aa		2.99	□□□□□ -1.93
U2AF1L4-210	ENST00000588892	KRTAP20-2	Q3LI61	65 aa		2.95	□□□□□ -1.94
U2AF1L4-210	ENST00000588892	MT3	P25713	68 aa		2.9	□□□□□ -1.94
U2AF1L4-210	ENST00000588892	KRTAP5-3	Q6L8H2	238 aa		2.84	□□□□□ -1.96
U2AF1L4-210	ENST00000588892	KRTAP5-2	Q701N4	177 aa		2.84	□□□□□ -1.96
U2AF1L4-210	ENST00000588892	AHNAK2	Q8IVF2	5795 aa		2.71	□□□□□ -1.98
U2AF1L4-210	ENST00000588892	KRTAP5-10	Q6L8G5	202 aa		2.65	□□□□□ -1.98
U2AF1L4-210	ENST00000588892	LCE1F	Q5T754	118 aa		2.65	□□□□□ -1.99
U2AF1L4-210	ENST00000588892	KRTAP5-7	Q6L8G8	165 aa		2.59	□□□□□ -1.99
U2AF1L4-210	ENST00000588892	LCE1E	Q5T753	118 aa		2.58	□□□□□ -2
U2AF1L4-210	ENST00000588892	KRTAP5-1	Q6L8H4	278 aa		2.5	□□□□□ -2.01
U2AF1L4-210	ENST00000588892	MUC5AC	P98088	5654 aa		2.48	□□□□□ -2.01
U2AF1L4-210	ENST00000588892	KRTAP5-8	O75690	187 aa		2.47	□□□□□ -2.01
U2AF1L4-210	ENST00000588892	LCE1B	Q5T7P3	118 aa		2.46	□□□□□ -2.02
U2AF1L4-210	ENST00000588892	LCE1C	Q5T751	118 aa		2.34	□□□□□ -2.04
U2AF1L4-210	ENST00000588892	AHNAK	Q09666	5890 aa	Known RBP	2.33	□□□□□ -2.04
U2AF1L4-210	ENST00000588892	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.27	□□□□□ -2.05
U2AF1L4-210	ENST00000588892	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.16	□□□□□ -2.06
U2AF1L4-210	ENST00000588892	KRTAP5-11	Q6L8G4	156 aa		2.15	□□□□□ -2.07
U2AF1L4-210	ENST00000588892	KRTAP21-2	Q3LI59	83 aa		2.14	□□□□□ -2.07
U2AF1L4-210	ENST00000588892	MUC19	Q7Z5P9	8384 aa		2.13	□□□□□ -2.07
U2AF1L4-210	ENST00000588892	KRTAP4-4	Q9BYR3	166 aa		2.01	□□□□□ -2.09
U2AF1L4-210	ENST00000588892	KRTAP21-1	Q3LI58	79 aa		1.97	□□□□□ -2.09
U2AF1L4-210	ENST00000588892	PHGR1	C9JFL3	82 aa		1.79	□□□□□ -2.12
U2AF1L4-210	ENST00000588892	MUC16	Q8WXI7	14507 aa		1.13	□□□□□ -2.23

Retrieved 78 of 20,778 RNA–protein pairs in 89.7 ms