RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 KRTAP9-7A8MTY7 169 aa5.33□□□□□ -1.56
NPC1-207ENST00000588867 MT1EP04732 61 aa5.3□□□□□ -1.56
NPC1-207ENST00000588867 MUC12Q9UKN1 5478 aa5.21□□□□□ -1.57
NPC1-207ENST00000588867 LUZP6Q538Z0 58 aa5.19□□□□□ -1.58
NPC1-207ENST00000588867 MT1LQ93083 61 aa5.17□□□□□ -1.58
NPC1-207ENST00000588867 SPRR2EP22531 72 aa5.16□□□□□ -1.58
NPC1-207ENST00000588867 SPRR2BP35325 72 aa5.16□□□□□ -1.58
NPC1-207ENST00000588867 SPRR2AP35326 72 aa5.16□□□□□ -1.58
NPC1-207ENST00000588867 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.58
NPC1-207ENST00000588867 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
NPC1-207ENST00000588867 MT1GP13640 62 aa5.09□□□□□ -1.6
NPC1-207ENST00000588867 MDN1Q9NU22 5596 aa5.08□□□□□ -1.6
NPC1-207ENST00000588867 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
NPC1-207ENST00000588867 MT1MQ8N339 61 aa5.02□□□□□ -1.61
NPC1-207ENST00000588867 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
NPC1-207ENST00000588867 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
NPC1-207ENST00000588867 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
NPC1-207ENST00000588867 SPRR2DP22532 72 aa4.98□□□□□ -1.61
NPC1-207ENST00000588867 NEBP20929 6669 aa4.97□□□□□ -1.61
NPC1-207ENST00000588867 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
NPC1-207ENST00000588867 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
NPC1-207ENST00000588867 DSTQ03001 7570 aaKnown RBP4.82□□□□□ -1.64
NPC1-207ENST00000588867 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
NPC1-207ENST00000588867 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
NPC1-207ENST00000588867 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
NPC1-207ENST00000588867 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
NPC1-207ENST00000588867 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
NPC1-207ENST00000588867 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
NPC1-207ENST00000588867 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
NPC1-207ENST00000588867 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
NPC1-207ENST00000588867 INE1O15225 51 aa4.59□□□□□ -1.67
NPC1-207ENST00000588867 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
NPC1-207ENST00000588867 KRTAP4-6Q9BYQ5 205 aa4.51□□□□□ -1.69
NPC1-207ENST00000588867 KRTAP5-4Q6L8H1 288 aa4.41□□□□□ -1.7
NPC1-207ENST00000588867 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
NPC1-207ENST00000588867 MT1AP04731 61 aa4.39□□□□□ -1.71
NPC1-207ENST00000588867 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
NPC1-207ENST00000588867 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
NPC1-207ENST00000588867 MT4P47944 62 aa4.34□□□□□ -1.71
NPC1-207ENST00000588867 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
NPC1-207ENST00000588867 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
NPC1-207ENST00000588867 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
NPC1-207ENST00000588867 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
NPC1-207ENST00000588867 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.75
NPC1-207ENST00000588867 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
NPC1-207ENST00000588867 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
NPC1-207ENST00000588867 KRTAP5-3Q6L8H2 238 aa4.04□□□□□ -1.76
NPC1-207ENST00000588867 MT3P25713 68 aa4□□□□□ -1.77
NPC1-207ENST00000588867 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
NPC1-207ENST00000588867 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
NPC1-207ENST00000588867 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
NPC1-207ENST00000588867 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
NPC1-207ENST00000588867 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
NPC1-207ENST00000588867 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
NPC1-207ENST00000588867 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
NPC1-207ENST00000588867 KRTAP5-10Q6L8G5 202 aa3.65□□□□□ -1.83
NPC1-207ENST00000588867 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
NPC1-207ENST00000588867 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
NPC1-207ENST00000588867 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
NPC1-207ENST00000588867 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
NPC1-207ENST00000588867 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
NPC1-207ENST00000588867 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
NPC1-207ENST00000588867 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
NPC1-207ENST00000588867 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
NPC1-207ENST00000588867 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
NPC1-207ENST00000588867 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
NPC1-207ENST00000588867 PRM1P04553 51 aa3.14□□□□□ -1.91
NPC1-207ENST00000588867 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
NPC1-207ENST00000588867 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
NPC1-207ENST00000588867 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
NPC1-207ENST00000588867 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
NPC1-207ENST00000588867 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
NPC1-207ENST00000588867 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
NPC1-207ENST00000588867 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
NPC1-207ENST00000588867 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
NPC1-207ENST00000588867 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
NPC1-207ENST00000588867 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
NPC1-207ENST00000588867 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 195.5 ms