RNA–Protein interactions for RNA: ENST00000588858.5

C19orf53-204, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 3

Gene C19orf53, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-204ENST00000588858 SPRR2BP35325 72 aa2.96□□□□□ -1.94
C19orf53-204ENST00000588858 SPRR2AP35326 72 aa2.96□□□□□ -1.94
C19orf53-204ENST00000588858 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
C19orf53-204ENST00000588858 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
C19orf53-204ENST00000588858 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
C19orf53-204ENST00000588858 KRTAP12-3P60328 96 aa2.92□□□□□ -1.94
C19orf53-204ENST00000588858 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
C19orf53-204ENST00000588858 KRTAP19-4Q3LI73 84 aa2.91□□□□□ -1.94
C19orf53-204ENST00000588858 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
C19orf53-204ENST00000588858 MT1GP13640 62 aa2.9□□□□□ -1.95
C19orf53-204ENST00000588858 MT1LQ93083 61 aa2.9□□□□□ -1.95
C19orf53-204ENST00000588858 SPRR2DP22532 72 aa2.87□□□□□ -1.95
C19orf53-204ENST00000588858 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
C19orf53-204ENST00000588858 KRTAP2-3P0C7H8 128 aa2.85□□□□□ -1.95
C19orf53-204ENST00000588858 KRTAP2-4Q9BYR9 128 aa2.85□□□□□ -1.95
C19orf53-204ENST00000588858 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
C19orf53-204ENST00000588858 MT1MQ8N339 61 aa2.83□□□□□ -1.96
C19orf53-204ENST00000588858 KRTAP15-1Q3LI76 137 aa2.82□□□□□ -1.96
C19orf53-204ENST00000588858 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
C19orf53-204ENST00000588858 KRTAP2-1Q9BYU5 128 aa2.78□□□□□ -1.96
C19orf53-204ENST00000588858 LCE3BQ5TA77 95 aa2.77□□□□□ -1.97
C19orf53-204ENST00000588858 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
C19orf53-204ENST00000588858 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
C19orf53-204ENST00000588858 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
C19orf53-204ENST00000588858 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
C19orf53-204ENST00000588858 KTN1-AS1Q86SY8 53 aa2.72□□□□□ -1.97
C19orf53-204ENST00000588858 KRTAP4-7Q9BYR0 210 aa2.7□□□□□ -1.98
C19orf53-204ENST00000588858 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
C19orf53-204ENST00000588858 PRAC1Q96KF2 57 aa2.66□□□□□ -1.98
C19orf53-204ENST00000588858 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
C19orf53-204ENST00000588858 KRTAP9-4Q9BYQ2 154 aa2.65□□□□□ -1.99
C19orf53-204ENST00000588858 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
C19orf53-204ENST00000588858 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
C19orf53-204ENST00000588858 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
C19orf53-204ENST00000588858 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
C19orf53-204ENST00000588858 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
C19orf53-204ENST00000588858 MT1AP04731 61 aa2.49□□□□□ -2.01
C19orf53-204ENST00000588858 LCE1DQ5T752 114 aa2.49□□□□□ -2.01
C19orf53-204ENST00000588858 KRTAP4-9Q9BYQ8 210 aa2.47□□□□□ -2.01
C19orf53-204ENST00000588858 KRTAP12-4P60329 112 aa2.46□□□□□ -2.02
C19orf53-204ENST00000588858 MT4P47944 62 aa2.44□□□□□ -2.02
C19orf53-204ENST00000588858 SYNE1Q8NF91 8797 aaKnown RBP2.42□□□□□ -2.02
C19orf53-204ENST00000588858 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
C19orf53-204ENST00000588858 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
C19orf53-204ENST00000588858 KRTAP5-3Q6L8H2 238 aa2.37□□□□□ -2.03
C19orf53-204ENST00000588858 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
C19orf53-204ENST00000588858 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
C19orf53-204ENST00000588858 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
C19orf53-204ENST00000588858 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
C19orf53-204ENST00000588858 MT3P25713 68 aa2.26□□□□□ -2.05
C19orf53-204ENST00000588858 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
C19orf53-204ENST00000588858 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
C19orf53-204ENST00000588858 LUZP6Q538Z0 58 aa2.25□□□□□ -2.05
C19orf53-204ENST00000588858 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
C19orf53-204ENST00000588858 NDUFAF8A1L188 74 aa2.16□□□□□ -2.06
C19orf53-204ENST00000588858 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
C19orf53-204ENST00000588858 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
C19orf53-204ENST00000588858 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
C19orf53-204ENST00000588858 LCE1EQ5T753 118 aa2.07□□□□□ -2.08
C19orf53-204ENST00000588858 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
C19orf53-204ENST00000588858 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
C19orf53-204ENST00000588858 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
C19orf53-204ENST00000588858 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
C19orf53-204ENST00000588858 LCE3EQ5T5B0 92 aa1.93□□□□□ -2.1
C19orf53-204ENST00000588858 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
C19orf53-204ENST00000588858 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
C19orf53-204ENST00000588858 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
C19orf53-204ENST00000588858 INE1O15225 51 aa1.89□□□□□ -2.11
C19orf53-204ENST00000588858 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
C19orf53-204ENST00000588858 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
C19orf53-204ENST00000588858 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
C19orf53-204ENST00000588858 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
C19orf53-204ENST00000588858 PRM1P04553 51 aa1.53□□□□□ -2.16
C19orf53-204ENST00000588858 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
C19orf53-204ENST00000588858 KRTAP4-4Q9BYR3 166 aa1.36□□□□□ -2.19
C19orf53-204ENST00000588858 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
C19orf53-204ENST00000588858 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
C19orf53-204ENST00000588858 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms