RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
NEDD4L-224ENST00000588712 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
NEDD4L-224ENST00000588712 MT1EP04732 61 aa3.85□□□□□ -1.79
NEDD4L-224ENST00000588712 KRTAP6-3Q3LI67 103 aa3.85□□□□□ -1.79
NEDD4L-224ENST00000588712 SPRR2FQ96RM1 72 aa3.85□□□□□ -1.79
NEDD4L-224ENST00000588712 MT1LQ93083 61 aa3.76□□□□□ -1.81
NEDD4L-224ENST00000588712 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
NEDD4L-224ENST00000588712 MT1GP13640 62 aa3.74□□□□□ -1.81
NEDD4L-224ENST00000588712 KRTAP9-7A8MTY7 169 aa3.74□□□□□ -1.81
NEDD4L-224ENST00000588712 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
NEDD4L-224ENST00000588712 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
NEDD4L-224ENST00000588712 SPRR2EP22531 72 aa3.68□□□□□ -1.82
NEDD4L-224ENST00000588712 SPRR2BP35325 72 aa3.68□□□□□ -1.82
NEDD4L-224ENST00000588712 SPRR2AP35326 72 aa3.68□□□□□ -1.82
NEDD4L-224ENST00000588712 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
NEDD4L-224ENST00000588712 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
NEDD4L-224ENST00000588712 MT1MQ8N339 61 aa3.64□□□□□ -1.83
NEDD4L-224ENST00000588712 MDN1Q9NU22 5596 aa3.59□□□□□ -1.83
NEDD4L-224ENST00000588712 SPRR2DP22532 72 aa3.56□□□□□ -1.84
NEDD4L-224ENST00000588712 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
NEDD4L-224ENST00000588712 NEBP20929 6669 aa3.56□□□□□ -1.84
NEDD4L-224ENST00000588712 LOC100996750A0A140TA64 210 aa3.51□□□□□ -1.85
NEDD4L-224ENST00000588712 KRTAP4-6Q9BYQ5 205 aa3.51□□□□□ -1.85
NEDD4L-224ENST00000588712 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
NEDD4L-224ENST00000588712 LCE3BQ5TA77 95 aa3.42□□□□□ -1.86
NEDD4L-224ENST00000588712 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
NEDD4L-224ENST00000588712 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.86
NEDD4L-224ENST00000588712 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.87
NEDD4L-224ENST00000588712 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.87
NEDD4L-224ENST00000588712 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.88
NEDD4L-224ENST00000588712 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
NEDD4L-224ENST00000588712 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
NEDD4L-224ENST00000588712 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
NEDD4L-224ENST00000588712 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
NEDD4L-224ENST00000588712 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
NEDD4L-224ENST00000588712 MT1AP04731 61 aa3.23□□□□□ -1.89
NEDD4L-224ENST00000588712 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
NEDD4L-224ENST00000588712 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
NEDD4L-224ENST00000588712 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
NEDD4L-224ENST00000588712 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
NEDD4L-224ENST00000588712 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
NEDD4L-224ENST00000588712 MT4P47944 62 aa3.05□□□□□ -1.92
NEDD4L-224ENST00000588712 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
NEDD4L-224ENST00000588712 LCE1DQ5T752 114 aa3.02□□□□□ -1.93
NEDD4L-224ENST00000588712 KRTAP4-9Q9BYQ8 210 aa3.02□□□□□ -1.93
NEDD4L-224ENST00000588712 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
NEDD4L-224ENST00000588712 MT3P25713 68 aa2.96□□□□□ -1.94
NEDD4L-224ENST00000588712 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
NEDD4L-224ENST00000588712 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
NEDD4L-224ENST00000588712 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
NEDD4L-224ENST00000588712 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
NEDD4L-224ENST00000588712 KRTAP4-11Q9BYQ6 195 aa2.81□□□□□ -1.96
NEDD4L-224ENST00000588712 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
NEDD4L-224ENST00000588712 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
NEDD4L-224ENST00000588712 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
NEDD4L-224ENST00000588712 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
NEDD4L-224ENST00000588712 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
NEDD4L-224ENST00000588712 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
NEDD4L-224ENST00000588712 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
NEDD4L-224ENST00000588712 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
NEDD4L-224ENST00000588712 PRM1P04553 51 aa2.56□□□□□ -2
NEDD4L-224ENST00000588712 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
NEDD4L-224ENST00000588712 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
NEDD4L-224ENST00000588712 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
NEDD4L-224ENST00000588712 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
NEDD4L-224ENST00000588712 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
NEDD4L-224ENST00000588712 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
NEDD4L-224ENST00000588712 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
NEDD4L-224ENST00000588712 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
NEDD4L-224ENST00000588712 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
NEDD4L-224ENST00000588712 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
NEDD4L-224ENST00000588712 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
NEDD4L-224ENST00000588712 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
NEDD4L-224ENST00000588712 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
NEDD4L-224ENST00000588712 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
NEDD4L-224ENST00000588712 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.13
NEDD4L-224ENST00000588712 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
NEDD4L-224ENST00000588712 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms