RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 SPRR2EP22531 72 aa8.17□□□□□ -1.1
ACTN4-210ENST00000588618 SPRR2BP35325 72 aa8.17□□□□□ -1.1
ACTN4-210ENST00000588618 SPRR2AP35326 72 aa8.17□□□□□ -1.1
ACTN4-210ENST00000588618 LCE1AQ5T7P2 110 aa8.12□□□□□ -1.11
ACTN4-210ENST00000588618 KRTAP19-3Q7Z4W3 81 aa8.09□□□□□ -1.11
ACTN4-210ENST00000588618 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
ACTN4-210ENST00000588618 MT1LQ93083 61 aa8.07□□□□□ -1.12
ACTN4-210ENST00000588618 NEBP20929 6669 aa7.99□□□□□ -1.13
ACTN4-210ENST00000588618 MT1GP13640 62 aa7.98□□□□□ -1.13
ACTN4-210ENST00000588618 LCE5AQ5TCM9 118 aa7.96□□□□□ -1.14
ACTN4-210ENST00000588618 SPRR2DP22532 72 aa7.89□□□□□ -1.15
ACTN4-210ENST00000588618 KRTAP19-4Q3LI73 84 aa7.89□□□□□ -1.15
ACTN4-210ENST00000588618 MT1MQ8N339 61 aa7.84□□□□□ -1.15
ACTN4-210ENST00000588618 KRTAP4-7Q9BYR0 210 aa7.81□□□□□ -1.16
ACTN4-210ENST00000588618 LCE3CQ5T5A8 94 aa7.75□□□□□ -1.17
ACTN4-210ENST00000588618 KRTAP4-3Q9BYR4 195 aa7.72□□□□□ -1.17
ACTN4-210ENST00000588618 DSTQ03001 7570 aaKnown RBP7.7□□□□□ -1.18
ACTN4-210ENST00000588618 H3BS24 57 aa7.61□□□□□ -1.19
ACTN4-210ENST00000588618 LCE3BQ5TA77 95 aa7.6□□□□□ -1.19
ACTN4-210ENST00000588618 KRTAP2-3P0C7H8 128 aa7.57□□□□□ -1.2
ACTN4-210ENST00000588618 KRTAP20-1Q3LI63 56 aa7.57□□□□□ -1.2
ACTN4-210ENST00000588618 KRTAP2-4Q9BYR9 128 aa7.57□□□□□ -1.2
ACTN4-210ENST00000588618 KRTAP2-2Q9BYT5 123 aa7.39□□□□□ -1.23
ACTN4-210ENST00000588618 KRTAP2-1Q9BYU5 128 aa7.39□□□□□ -1.23
ACTN4-210ENST00000588618 KRTAP9-6A8MVA2 160 aa7.38□□□□□ -1.23
ACTN4-210ENST00000588618 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
ACTN4-210ENST00000588618 SPRR5A0A1B0GTR4 108 aa7.33□□□□□ -1.24
ACTN4-210ENST00000588618 KRTAP5-5Q701N2 237 aaPredicted RBP7.13□□□□□ -1.27
ACTN4-210ENST00000588618 NDUFAF8A1L188 74 aa7.04□□□□□ -1.28
ACTN4-210ENST00000588618 LCE4AQ5TA78 99 aa6.98□□□□□ -1.29
ACTN4-210ENST00000588618 LUZP6Q538Z0 58 aa6.98□□□□□ -1.29
ACTN4-210ENST00000588618 KRTAP5-4Q6L8H1 288 aa6.98□□□□□ -1.29
ACTN4-210ENST00000588618 SYNE1Q8NF91 8797 aaKnown RBP6.91□□□□□ -1.3
ACTN4-210ENST00000588618 MT1AP04731 61 aa6.87□□□□□ -1.31
ACTN4-210ENST00000588618 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
ACTN4-210ENST00000588618 MT4P47944 62 aa6.84□□□□□ -1.31
ACTN4-210ENST00000588618 KRTAP6-1Q3LI64 71 aa6.82□□□□□ -1.32
ACTN4-210ENST00000588618 KRTAP12-4P60329 112 aa6.79□□□□□ -1.32
ACTN4-210ENST00000588618 LCE1DQ5T752 114 aa6.77□□□□□ -1.33
ACTN4-210ENST00000588618 HMCN1Q96RW7 5635 aa6.72□□□□□ -1.33
ACTN4-210ENST00000588618 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
ACTN4-210ENST00000588618 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
ACTN4-210ENST00000588618 KRTAP20-2Q3LI61 65 aa6.55□□□□□ -1.36
ACTN4-210ENST00000588618 A0A0A0MQY5 61 aa6.45□□□□□ -1.38
ACTN4-210ENST00000588618 KRTAP6-2Q3LI66 62 aa6.34□□□□□ -1.39
ACTN4-210ENST00000588618 KRTAP5-3Q6L8H2 238 aa6.33□□□□□ -1.4
ACTN4-210ENST00000588618 MT3P25713 68 aa6.28□□□□□ -1.4
ACTN4-210ENST00000588618 KRTAP5-2Q701N4 177 aa6.28□□□□□ -1.4
ACTN4-210ENST00000588618 AHNAK2Q8IVF2 5795 aa6.13□□□□□ -1.43
ACTN4-210ENST00000588618 OBSCNQ5VST9 7968 aa5.99□□□□□ -1.45
ACTN4-210ENST00000588618 INE1O15225 51 aa5.88□□□□□ -1.47
ACTN4-210ENST00000588618 KRTAP5-10Q6L8G5 202 aa5.84□□□□□ -1.47
ACTN4-210ENST00000588618 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
ACTN4-210ENST00000588618 GPR98Q8WXG9 6306 aa5.79□□□□□ -1.48
ACTN4-210ENST00000588618 LCE3DQ9BYE3 92 aa5.78□□□□□ -1.48
ACTN4-210ENST00000588618 LCE3EQ5T5B0 92 aa5.57□□□□□ -1.52
ACTN4-210ENST00000588618 KRTAP5-8O75690 187 aa5.56□□□□□ -1.52
ACTN4-210ENST00000588618 LCE1EQ5T753 118 aa5.54□□□□□ -1.52
ACTN4-210ENST00000588618 KRTAP5-7Q6L8G8 165 aa5.49□□□□□ -1.53
ACTN4-210ENST00000588618 KRTAP5-1Q6L8H4 278 aa5.48□□□□□ -1.53
ACTN4-210ENST00000588618 MUC5ACP98088 5654 aa5.38□□□□□ -1.55
ACTN4-210ENST00000588618 LCE1BQ5T7P3 118 aa5.22□□□□□ -1.57
ACTN4-210ENST00000588618 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
ACTN4-210ENST00000588618 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
ACTN4-210ENST00000588618 LCE1CQ5T751 118 aa5.14□□□□□ -1.59
ACTN4-210ENST00000588618 MUC5BQ9HC84 5762 aaPredicted RBP4.95□□□□□ -1.62
ACTN4-210ENST00000588618 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
ACTN4-210ENST00000588618 AHNAKQ09666 5890 aaKnown RBP4.73□□□□□ -1.65
ACTN4-210ENST00000588618 PRM1P04553 51 aa4.66□□□□□ -1.66
ACTN4-210ENST00000588618 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
ACTN4-210ENST00000588618 KRTAP21-2Q3LI59 83 aa4.49□□□□□ -1.69
ACTN4-210ENST00000588618 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
ACTN4-210ENST00000588618 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
ACTN4-210ENST00000588618 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
ACTN4-210ENST00000588618 PHGR1C9JFL3 82 aa3.92□□□□□ -1.78
ACTN4-210ENST00000588618 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
ACTN4-210ENST00000588618 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
ACTN4-210ENST00000588618 MUC16Q8WXI7 14507 aa2.55□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms