RNA–Protein interactions for RNA: ENST00000588520.1

RFX1-203, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-203ENST00000588520 DSTQ03001 7570 aaKnown RBP6.21□□□□□ -1.42
RFX1-203ENST00000588520 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
RFX1-203ENST00000588520 K7ERS5 55 aa6.18□□□□□ -1.42
RFX1-203ENST00000588520 PSPHP1O15172 72 aa6.12□□□□□ -1.43
RFX1-203ENST00000588520 MT1LQ93083 61 aa6.12□□□□□ -1.43
RFX1-203ENST00000588520 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
RFX1-203ENST00000588520 MT1MQ8N339 61 aa6.07□□□□□ -1.44
RFX1-203ENST00000588520 KRTAP12-3P60328 96 aa6.02□□□□□ -1.45
RFX1-203ENST00000588520 A6NED7 52 aa5.97□□□□□ -1.45
RFX1-203ENST00000588520 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
RFX1-203ENST00000588520 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
RFX1-203ENST00000588520 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
RFX1-203ENST00000588520 KRTAP4-9Q9BYQ8 210 aa5.83□□□□□ -1.48
RFX1-203ENST00000588520 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
RFX1-203ENST00000588520 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
RFX1-203ENST00000588520 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
RFX1-203ENST00000588520 LCE1DQ5T752 114 aa5.76□□□□□ -1.49
RFX1-203ENST00000588520 KRTAP5-4Q6L8H1 288 aa5.76□□□□□ -1.49
RFX1-203ENST00000588520 BRK1Q8WUW1 75 aa5.75□□□□□ -1.49
RFX1-203ENST00000588520 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
RFX1-203ENST00000588520 PRO0628Q9UI54 55 aa5.74□□□□□ -1.49
RFX1-203ENST00000588520 ROMO1P60602 79 aa5.72□□□□□ -1.49
RFX1-203ENST00000588520 MT4P47944 62 aa5.69□□□□□ -1.5
RFX1-203ENST00000588520 GPR98Q8WXG9 6306 aa5.69□□□□□ -1.5
RFX1-203ENST00000588520 HMCN1Q96RW7 5635 aa5.68□□□□□ -1.5
RFX1-203ENST00000588520 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
RFX1-203ENST00000588520 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
RFX1-203ENST00000588520 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
RFX1-203ENST00000588520 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
RFX1-203ENST00000588520 PMAIP1Q13794 54 aa5.46□□□□□ -1.54
RFX1-203ENST00000588520 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
RFX1-203ENST00000588520 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
RFX1-203ENST00000588520 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
RFX1-203ENST00000588520 AHNAK2Q8IVF2 5795 aa5.42□□□□□ -1.54
RFX1-203ENST00000588520 KRTAP20-2Q3LI61 65 aa5.4□□□□□ -1.54
RFX1-203ENST00000588520 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
RFX1-203ENST00000588520 KRTAP5-10Q6L8G5 202 aa5.32□□□□□ -1.56
RFX1-203ENST00000588520 KTN1-AS1Q86SY8 53 aa5.28□□□□□ -1.56
RFX1-203ENST00000588520 MT1AP04731 61 aa5.24□□□□□ -1.57
RFX1-203ENST00000588520 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
RFX1-203ENST00000588520 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
RFX1-203ENST00000588520 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
RFX1-203ENST00000588520 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
RFX1-203ENST00000588520 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
RFX1-203ENST00000588520 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
RFX1-203ENST00000588520 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
RFX1-203ENST00000588520 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
RFX1-203ENST00000588520 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
RFX1-203ENST00000588520 MT3P25713 68 aa4.81□□□□□ -1.64
RFX1-203ENST00000588520 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
RFX1-203ENST00000588520 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
RFX1-203ENST00000588520 KRTAP5-1Q6L8H4 278 aa4.5□□□□□ -1.69
RFX1-203ENST00000588520 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
RFX1-203ENST00000588520 AHNAKQ09666 5890 aaKnown RBP4.45□□□□□ -1.7
RFX1-203ENST00000588520 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
RFX1-203ENST00000588520 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
RFX1-203ENST00000588520 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
RFX1-203ENST00000588520 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
RFX1-203ENST00000588520 NDUFAF8A1L188 74 aa4.17□□□□□ -1.74
RFX1-203ENST00000588520 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
RFX1-203ENST00000588520 H3BS24 57 aa4.09□□□□□ -1.75
RFX1-203ENST00000588520 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
RFX1-203ENST00000588520 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
RFX1-203ENST00000588520 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
RFX1-203ENST00000588520 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
RFX1-203ENST00000588520 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
RFX1-203ENST00000588520 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
RFX1-203ENST00000588520 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
RFX1-203ENST00000588520 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
RFX1-203ENST00000588520 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
RFX1-203ENST00000588520 INE1O15225 51 aa3.51□□□□□ -1.85
RFX1-203ENST00000588520 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
RFX1-203ENST00000588520 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
RFX1-203ENST00000588520 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
RFX1-203ENST00000588520 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
RFX1-203ENST00000588520 PRM1P04553 51 aa2.89□□□□□ -1.95
RFX1-203ENST00000588520 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
RFX1-203ENST00000588520 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 81.9 ms