RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
CNN1-207ENST00000588468 LINC01558Q9Y6Z2 57 aa3.68□□□□□ -1.82
CNN1-207ENST00000588468 K7ERS5 55 aa3.67□□□□□ -1.82
CNN1-207ENST00000588468 TNP1P09430 55 aa3.64□□□□□ -1.83
CNN1-207ENST00000588468 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
CNN1-207ENST00000588468 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
CNN1-207ENST00000588468 UQCR11O14957 56 aa3.61□□□□□ -1.83
CNN1-207ENST00000588468 C10orf95Q9H7T3 257 aa3.61□□□□□ -1.83
CNN1-207ENST00000588468 MT1GP13640 62 aa3.6□□□□□ -1.83
CNN1-207ENST00000588468 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
CNN1-207ENST00000588468 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
CNN1-207ENST00000588468 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
CNN1-207ENST00000588468 MT1LQ93083 61 aa3.55□□□□□ -1.84
CNN1-207ENST00000588468 A6NED7 52 aa3.54□□□□□ -1.84
CNN1-207ENST00000588468 MT1MQ8N339 61 aa3.53□□□□□ -1.84
CNN1-207ENST00000588468 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
CNN1-207ENST00000588468 KRTAP12-3P60328 96 aa3.46□□□□□ -1.86
CNN1-207ENST00000588468 Q1T7F1 81 aa3.46□□□□□ -1.86
CNN1-207ENST00000588468 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
CNN1-207ENST00000588468 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
CNN1-207ENST00000588468 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
CNN1-207ENST00000588468 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
CNN1-207ENST00000588468 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
CNN1-207ENST00000588468 KRTAP19-4Q3LI73 84 aa3.41□□□□□ -1.86
CNN1-207ENST00000588468 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
CNN1-207ENST00000588468 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
CNN1-207ENST00000588468 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
CNN1-207ENST00000588468 ROMO1P60602 79 aa3.37□□□□□ -1.87
CNN1-207ENST00000588468 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
CNN1-207ENST00000588468 MT4P47944 62 aa3.34□□□□□ -1.87
CNN1-207ENST00000588468 KRTAP4-7Q9BYR0 210 aa3.32□□□□□ -1.88
CNN1-207ENST00000588468 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
CNN1-207ENST00000588468 CDC42SE1Q9NRR8 79 aa3.28□□□□□ -1.88
CNN1-207ENST00000588468 KRTAP15-1Q3LI76 137 aa3.27□□□□□ -1.89
CNN1-207ENST00000588468 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
CNN1-207ENST00000588468 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
CNN1-207ENST00000588468 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
CNN1-207ENST00000588468 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
CNN1-207ENST00000588468 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
CNN1-207ENST00000588468 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
CNN1-207ENST00000588468 LOC100996750A0A140TA64 210 aa3.15□□□□□ -1.91
CNN1-207ENST00000588468 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
CNN1-207ENST00000588468 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.91
CNN1-207ENST00000588468 KRTAP5-3Q6L8H2 238 aa3.08□□□□□ -1.92
CNN1-207ENST00000588468 MT1AP04731 61 aa3.04□□□□□ -1.92
CNN1-207ENST00000588468 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
CNN1-207ENST00000588468 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
CNN1-207ENST00000588468 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
CNN1-207ENST00000588468 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
CNN1-207ENST00000588468 KRTAP9-4Q9BYQ2 154 aa2.9□□□□□ -1.95
CNN1-207ENST00000588468 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
CNN1-207ENST00000588468 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
CNN1-207ENST00000588468 INE1O15225 51 aa2.82□□□□□ -1.96
CNN1-207ENST00000588468 MT3P25713 68 aa2.81□□□□□ -1.96
CNN1-207ENST00000588468 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
CNN1-207ENST00000588468 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
CNN1-207ENST00000588468 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
CNN1-207ENST00000588468 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
CNN1-207ENST00000588468 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
CNN1-207ENST00000588468 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
CNN1-207ENST00000588468 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
CNN1-207ENST00000588468 LCE1EQ5T753 118 aa2.55□□□□□ -2
CNN1-207ENST00000588468 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
CNN1-207ENST00000588468 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
CNN1-207ENST00000588468 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
CNN1-207ENST00000588468 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
CNN1-207ENST00000588468 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
CNN1-207ENST00000588468 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
CNN1-207ENST00000588468 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
CNN1-207ENST00000588468 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
CNN1-207ENST00000588468 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
CNN1-207ENST00000588468 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
CNN1-207ENST00000588468 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
CNN1-207ENST00000588468 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
CNN1-207ENST00000588468 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
CNN1-207ENST00000588468 PRM1P04553 51 aa1.63□□□□□ -2.15
CNN1-207ENST00000588468 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
CNN1-207ENST00000588468 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 58.9 ms