RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 MT1MQ8N339 61 aa7.44□□□□□ -1.22
NCLN-204ENST00000588428 MIR22HGQ0VDD5 57 aa7.3□□□□□ -1.24
NCLN-204ENST00000588428 KRTAP4-9Q9BYQ8 210 aa7.29□□□□□ -1.24
NCLN-204ENST00000588428 V9GYY9 64 aa7.25□□□□□ -1.25
NCLN-204ENST00000588428 GPR98Q8WXG9 6306 aa7.24□□□□□ -1.25
NCLN-204ENST00000588428 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
NCLN-204ENST00000588428 LCE4AQ5TA78 99 aa7.23□□□□□ -1.25
NCLN-204ENST00000588428 Q1T7F1 81 aa7.22□□□□□ -1.25
NCLN-204ENST00000588428 KRTAP4-3Q9BYR4 195 aa7.21□□□□□ -1.26
NCLN-204ENST00000588428 KRTAP25-1Q3LHN0 102 aa7.2□□□□□ -1.26
NCLN-204ENST00000588428 LCE1DQ5T752 114 aa7.18□□□□□ -1.26
NCLN-204ENST00000588428 K7ERS5 55 aa7.17□□□□□ -1.26
NCLN-204ENST00000588428 PSPHP1O15172 72 aa7.13□□□□□ -1.27
NCLN-204ENST00000588428 KRTAP5-4Q6L8H1 288 aa7.12□□□□□ -1.27
NCLN-204ENST00000588428 MT4P47944 62 aa7.06□□□□□ -1.28
NCLN-204ENST00000588428 KRTAP4-7Q9BYR0 210 aa7.05□□□□□ -1.28
NCLN-204ENST00000588428 HMCN1Q96RW7 5635 aa7□□□□□ -1.29
NCLN-204ENST00000588428 KRTAP23-1A1A580 65 aa6.99□□□□□ -1.29
NCLN-204ENST00000588428 KRTAP19-4Q3LI73 84 aa6.96□□□□□ -1.3
NCLN-204ENST00000588428 A6NED7 52 aa6.91□□□□□ -1.3
NCLN-204ENST00000588428 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
NCLN-204ENST00000588428 PRO0628Q9UI54 55 aa6.89□□□□□ -1.31
NCLN-204ENST00000588428 KRTAP5-5Q701N2 237 aaPredicted RBP6.86□□□□□ -1.31
NCLN-204ENST00000588428 BRK1Q8WUW1 75 aa6.84□□□□□ -1.31
NCLN-204ENST00000588428 SVIPQ8NHG7 77 aa6.83□□□□□ -1.32
NCLN-204ENST00000588428 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
NCLN-204ENST00000588428 CDC42SE1Q9NRR8 79 aa6.79□□□□□ -1.32
NCLN-204ENST00000588428 AHNAK2Q8IVF2 5795 aa6.74□□□□□ -1.33
NCLN-204ENST00000588428 SPRR5A0A1B0GTR4 108 aa6.69□□□□□ -1.34
NCLN-204ENST00000588428 LOC100996750A0A140TA64 210 aa6.68□□□□□ -1.34
NCLN-204ENST00000588428 ROMO1P60602 79 aa6.68□□□□□ -1.34
NCLN-204ENST00000588428 KRTAP20-2Q3LI61 65 aa6.68□□□□□ -1.34
NCLN-204ENST00000588428 LCE3CQ5T5A8 94 aa6.68□□□□□ -1.34
NCLN-204ENST00000588428 KRTAP5-10Q6L8G5 202 aa6.68□□□□□ -1.34
NCLN-204ENST00000588428 KRTAP12-4P60329 112 aa6.64□□□□□ -1.35
NCLN-204ENST00000588428 KRTAP5-3Q6L8H2 238 aa6.53□□□□□ -1.36
NCLN-204ENST00000588428 SYNE1Q8NF91 8797 aaKnown RBP6.5□□□□□ -1.37
NCLN-204ENST00000588428 PMAIP1Q13794 54 aa6.49□□□□□ -1.37
NCLN-204ENST00000588428 KRTAP5-7Q6L8G8 165 aa6.43□□□□□ -1.38
NCLN-204ENST00000588428 MT1AP04731 61 aa6.38□□□□□ -1.39
NCLN-204ENST00000588428 KTN1-AS1Q86SY8 53 aa6.35□□□□□ -1.39
NCLN-204ENST00000588428 KRTAP6-1Q3LI64 71 aa6.31□□□□□ -1.4
NCLN-204ENST00000588428 KRTAP9-6A8MVA2 160 aa6.29□□□□□ -1.4
NCLN-204ENST00000588428 KRTAP5-2Q701N4 177 aa6.26□□□□□ -1.41
NCLN-204ENST00000588428 KRTAP9-4Q9BYQ2 154 aa6.16□□□□□ -1.42
NCLN-204ENST00000588428 KRTAP4-11Q9BYQ6 195 aa6.09□□□□□ -1.43
NCLN-204ENST00000588428 KRTAP6-2Q3LI66 62 aa6.01□□□□□ -1.45
NCLN-204ENST00000588428 PRAC1Q96KF2 57 aa6□□□□□ -1.45
NCLN-204ENST00000588428 KRTAP5-8O75690 187 aa5.89□□□□□ -1.47
NCLN-204ENST00000588428 MT3P25713 68 aa5.83□□□□□ -1.48
NCLN-204ENST00000588428 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
NCLN-204ENST00000588428 KRTAP5-1Q6L8H4 278 aa5.58□□□□□ -1.52
NCLN-204ENST00000588428 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
NCLN-204ENST00000588428 AHNAKQ09666 5890 aaKnown RBP5.54□□□□□ -1.52
NCLN-204ENST00000588428 MUC5BQ9HC84 5762 aaPredicted RBP5.53□□□□□ -1.52
NCLN-204ENST00000588428 MUC5ACP98088 5654 aa5.51□□□□□ -1.53
NCLN-204ENST00000588428 LCE1EQ5T753 118 aa5.39□□□□□ -1.55
NCLN-204ENST00000588428 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
NCLN-204ENST00000588428 LCE1CQ5T751 118 aa4.99□□□□□ -1.61
NCLN-204ENST00000588428 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
NCLN-204ENST00000588428 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
NCLN-204ENST00000588428 NDUFAF8A1L188 74 aa4.9□□□□□ -1.63
NCLN-204ENST00000588428 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
NCLN-204ENST00000588428 H3BS24 57 aa4.63□□□□□ -1.67
NCLN-204ENST00000588428 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.58□□□□□ -1.68
NCLN-204ENST00000588428 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
NCLN-204ENST00000588428 KRTAP5-11Q6L8G4 156 aa4.53□□□□□ -1.68
NCLN-204ENST00000588428 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
NCLN-204ENST00000588428 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
NCLN-204ENST00000588428 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
NCLN-204ENST00000588428 INE1O15225 51 aa4.18□□□□□ -1.74
NCLN-204ENST00000588428 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
NCLN-204ENST00000588428 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
NCLN-204ENST00000588428 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
NCLN-204ENST00000588428 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
NCLN-204ENST00000588428 PRM1P04553 51 aa3.39□□□□□ -1.87
NCLN-204ENST00000588428 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
NCLN-204ENST00000588428 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 149.1 ms