RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
ERCC1-206ENST00000588300 A0A1B0GU69 56 aa5.72□□□□□ -1.49
ERCC1-206ENST00000588300 KRTAP12-1P59990 96 aa5.69□□□□□ -1.5
ERCC1-206ENST00000588300 MT1MQ8N339 61 aa5.68□□□□□ -1.5
ERCC1-206ENST00000588300 MT4P47944 62 aa5.67□□□□□ -1.5
ERCC1-206ENST00000588300 CCDC179H3BU77 68 aa5.66□□□□□ -1.5
ERCC1-206ENST00000588300 HMCN1Q96RW7 5635 aa5.66□□□□□ -1.5
ERCC1-206ENST00000588300 ATP5EP56381 51 aaPredicted RBP5.65□□□□□ -1.5
ERCC1-206ENST00000588300 MT1LQ93083 61 aa5.65□□□□□ -1.5
ERCC1-206ENST00000588300 SMIM26A0A096LP01 95 aa5.63□□□□□ -1.51
ERCC1-206ENST00000588300 PRR15LQ9BU68 103 aa5.58□□□□□ -1.52
ERCC1-206ENST00000588300 A8MU10 97 aa5.57□□□□□ -1.52
ERCC1-206ENST00000588300 KRTAP5-4Q6L8H1 288 aa5.55□□□□□ -1.52
ERCC1-206ENST00000588300 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
ERCC1-206ENST00000588300 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
ERCC1-206ENST00000588300 C10orf95Q9H7T3 257 aa5.54□□□□□ -1.52
ERCC1-206ENST00000588300 AHNAK2Q8IVF2 5795 aa5.52□□□□□ -1.53
ERCC1-206ENST00000588300 TNP1P09430 55 aa5.5□□□□□ -1.53
ERCC1-206ENST00000588300 TMEM258P61165 79 aa5.49□□□□□ -1.53
ERCC1-206ENST00000588300 KRTAP5-10Q6L8G5 202 aa5.47□□□□□ -1.53
ERCC1-206ENST00000588300 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
ERCC1-206ENST00000588300 UQCR11O14957 56 aa5.36□□□□□ -1.55
ERCC1-206ENST00000588300 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
ERCC1-206ENST00000588300 KRTAP5-7Q6L8G8 165 aa5.29□□□□□ -1.56
ERCC1-206ENST00000588300 KRTAP20-2Q3LI61 65 aa5.26□□□□□ -1.57
ERCC1-206ENST00000588300 MIR22HGQ0VDD5 57 aa5.24□□□□□ -1.57
ERCC1-206ENST00000588300 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
ERCC1-206ENST00000588300 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.58
ERCC1-206ENST00000588300 K7ERS5 55 aa5.19□□□□□ -1.58
ERCC1-206ENST00000588300 V9GYY9 64 aa5.19□□□□□ -1.58
ERCC1-206ENST00000588300 PSPHP1O15172 72 aa5.17□□□□□ -1.58
ERCC1-206ENST00000588300 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
ERCC1-206ENST00000588300 PCP4P48539 62 aa5.15□□□□□ -1.59
ERCC1-206ENST00000588300 KRTAP25-1Q3LHN0 102 aa5.11□□□□□ -1.59
ERCC1-206ENST00000588300 Q1T7F1 81 aa5.1□□□□□ -1.59
ERCC1-206ENST00000588300 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.6
ERCC1-206ENST00000588300 A6NED7 52 aa5.02□□□□□ -1.61
ERCC1-206ENST00000588300 SVIPQ8NHG7 77 aa4.91□□□□□ -1.62
ERCC1-206ENST00000588300 CDC42SE1Q9NRR8 79 aa4.9□□□□□ -1.63
ERCC1-206ENST00000588300 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
ERCC1-206ENST00000588300 RPS28P62857 69 aaKnown RBP4.82□□□□□ -1.64
ERCC1-206ENST00000588300 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
ERCC1-206ENST00000588300 MT1AP04731 61 aa4.81□□□□□ -1.64
ERCC1-206ENST00000588300 ROMO1P60602 79 aa4.79□□□□□ -1.64
ERCC1-206ENST00000588300 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
ERCC1-206ENST00000588300 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
ERCC1-206ENST00000588300 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
ERCC1-206ENST00000588300 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
ERCC1-206ENST00000588300 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
ERCC1-206ENST00000588300 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
ERCC1-206ENST00000588300 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
ERCC1-206ENST00000588300 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
ERCC1-206ENST00000588300 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
ERCC1-206ENST00000588300 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
ERCC1-206ENST00000588300 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
ERCC1-206ENST00000588300 MT3P25713 68 aa4.41□□□□□ -1.7
ERCC1-206ENST00000588300 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
ERCC1-206ENST00000588300 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
ERCC1-206ENST00000588300 PRO0628Q9UI54 55 aa4.23□□□□□ -1.73
ERCC1-206ENST00000588300 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
ERCC1-206ENST00000588300 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
ERCC1-206ENST00000588300 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
ERCC1-206ENST00000588300 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
ERCC1-206ENST00000588300 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
ERCC1-206ENST00000588300 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
ERCC1-206ENST00000588300 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
ERCC1-206ENST00000588300 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
ERCC1-206ENST00000588300 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
ERCC1-206ENST00000588300 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
ERCC1-206ENST00000588300 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
ERCC1-206ENST00000588300 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
ERCC1-206ENST00000588300 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
ERCC1-206ENST00000588300 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.91
ERCC1-206ENST00000588300 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
ERCC1-206ENST00000588300 INE1O15225 51 aa2.61□□□□□ -1.99
ERCC1-206ENST00000588300 PRM1P04553 51 aa2.46□□□□□ -2.02
ERCC1-206ENST00000588300 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
ERCC1-206ENST00000588300 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 484.5 ms