RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 LUZP6Q538Z0 58 aa5.84□□□□□ -1.47
NFIX-210ENST00000588228 SYNE2Q8WXH0 6885 aaKnown RBP5.82□□□□□ -1.48
NFIX-210ENST00000588228 SPRR2FQ96RM1 72 aa5.79□□□□□ -1.48
NFIX-210ENST00000588228 KRTAP19-3Q7Z4W3 81 aa5.73□□□□□ -1.49
NFIX-210ENST00000588228 KRTAP5-9P26371 169 aa5.69□□□□□ -1.5
NFIX-210ENST00000588228 MUC12Q9UKN1 5478 aa5.69□□□□□ -1.5
NFIX-210ENST00000588228 MT1GP13640 62 aa5.69□□□□□ -1.5
NFIX-210ENST00000588228 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
NFIX-210ENST00000588228 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
NFIX-210ENST00000588228 MT1MQ8N339 61 aa5.62□□□□□ -1.51
NFIX-210ENST00000588228 KRTAP6-3Q3LI67 103 aa5.59□□□□□ -1.51
NFIX-210ENST00000588228 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
NFIX-210ENST00000588228 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
NFIX-210ENST00000588228 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
NFIX-210ENST00000588228 MDN1Q9NU22 5596 aa5.46□□□□□ -1.54
NFIX-210ENST00000588228 SPRR2EP22531 72 aa5.46□□□□□ -1.54
NFIX-210ENST00000588228 SPRR2BP35325 72 aa5.46□□□□□ -1.54
NFIX-210ENST00000588228 SPRR2AP35326 72 aa5.46□□□□□ -1.54
NFIX-210ENST00000588228 NEBP20929 6669 aa5.4□□□□□ -1.54
NFIX-210ENST00000588228 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
NFIX-210ENST00000588228 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.56
NFIX-210ENST00000588228 SPRR2DP22532 72 aa5.25□□□□□ -1.57
NFIX-210ENST00000588228 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
NFIX-210ENST00000588228 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
NFIX-210ENST00000588228 KRTAP2-1Q9BYU5 128 aa5.18□□□□□ -1.58
NFIX-210ENST00000588228 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
NFIX-210ENST00000588228 KRTAP20-1Q3LI63 56 aa5.09□□□□□ -1.59
NFIX-210ENST00000588228 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
NFIX-210ENST00000588228 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
NFIX-210ENST00000588228 MT1AP04731 61 aa4.99□□□□□ -1.61
NFIX-210ENST00000588228 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
NFIX-210ENST00000588228 INE1O15225 51 aa4.93□□□□□ -1.62
NFIX-210ENST00000588228 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
NFIX-210ENST00000588228 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
NFIX-210ENST00000588228 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
NFIX-210ENST00000588228 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.66
NFIX-210ENST00000588228 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
NFIX-210ENST00000588228 LCE4AQ5TA78 99 aa4.67□□□□□ -1.66
NFIX-210ENST00000588228 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
NFIX-210ENST00000588228 MT4P47944 62 aa4.55□□□□□ -1.68
NFIX-210ENST00000588228 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
NFIX-210ENST00000588228 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
NFIX-210ENST00000588228 MT3P25713 68 aa4.52□□□□□ -1.69
NFIX-210ENST00000588228 KRTAP20-2Q3LI61 65 aa4.47□□□□□ -1.69
NFIX-210ENST00000588228 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
NFIX-210ENST00000588228 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
NFIX-210ENST00000588228 HMCN1Q96RW7 5635 aa4.4□□□□□ -1.7
NFIX-210ENST00000588228 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
NFIX-210ENST00000588228 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
NFIX-210ENST00000588228 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
NFIX-210ENST00000588228 GPR98Q8WXG9 6306 aa4.25□□□□□ -1.73
NFIX-210ENST00000588228 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
NFIX-210ENST00000588228 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
NFIX-210ENST00000588228 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
NFIX-210ENST00000588228 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
NFIX-210ENST00000588228 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
NFIX-210ENST00000588228 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
NFIX-210ENST00000588228 PRM1P04553 51 aa3.8□□□□□ -1.8
NFIX-210ENST00000588228 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
NFIX-210ENST00000588228 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
NFIX-210ENST00000588228 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.82
NFIX-210ENST00000588228 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
NFIX-210ENST00000588228 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
NFIX-210ENST00000588228 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
NFIX-210ENST00000588228 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
NFIX-210ENST00000588228 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
NFIX-210ENST00000588228 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
NFIX-210ENST00000588228 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
NFIX-210ENST00000588228 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
NFIX-210ENST00000588228 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
NFIX-210ENST00000588228 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
NFIX-210ENST00000588228 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
NFIX-210ENST00000588228 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
NFIX-210ENST00000588228 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
NFIX-210ENST00000588228 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
NFIX-210ENST00000588228 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
NFIX-210ENST00000588228 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 97.8 ms