RNA–Protein interactions for RNA: ENST00000588161.5

RBM42-203, Transcript of RNA binding motif protein 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM42, Length 1,609 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-203ENST00000588161 KRTAP19-3Q7Z4W3 81 aa7.81□□□□□ -1.16
RBM42-203ENST00000588161 KRTAP9-7A8MTY7 169 aa7.8□□□□□ -1.16
RBM42-203ENST00000588161 MT1GP13640 62 aa7.74□□□□□ -1.17
RBM42-203ENST00000588161 LCE1AQ5T7P2 110 aa7.72□□□□□ -1.17
RBM42-203ENST00000588161 LCE5AQ5TCM9 118 aa7.7□□□□□ -1.18
RBM42-203ENST00000588161 LCE3CQ5T5A8 94 aa7.69□□□□□ -1.18
RBM42-203ENST00000588161 MDN1Q9NU22 5596 aa7.68□□□□□ -1.18
RBM42-203ENST00000588161 SPRR2EP22531 72 aa7.67□□□□□ -1.18
RBM42-203ENST00000588161 SPRR2BP35325 72 aa7.67□□□□□ -1.18
RBM42-203ENST00000588161 SPRR2AP35326 72 aa7.67□□□□□ -1.18
RBM42-203ENST00000588161 MT1MQ8N339 61 aa7.61□□□□□ -1.19
RBM42-203ENST00000588161 KRTAP4-7Q9BYR0 210 aa7.56□□□□□ -1.2
RBM42-203ENST00000588161 SPRR5A0A1B0GTR4 108 aa7.52□□□□□ -1.21
RBM42-203ENST00000588161 NDUFAF8A1L188 74 aa7.52□□□□□ -1.21
RBM42-203ENST00000588161 LUZP6Q538Z0 58 aa7.48□□□□□ -1.21
RBM42-203ENST00000588161 NEBP20929 6669 aa7.44□□□□□ -1.22
RBM42-203ENST00000588161 KRTAP4-3Q9BYR4 195 aa7.41□□□□□ -1.22
RBM42-203ENST00000588161 SPRR2DP22532 72 aa7.41□□□□□ -1.22
RBM42-203ENST00000588161 H3BS24 57 aa7.35□□□□□ -1.23
RBM42-203ENST00000588161 DSTQ03001 7570 aaKnown RBP7.23□□□□□ -1.25
RBM42-203ENST00000588161 KRTAP9-6A8MVA2 160 aa7.23□□□□□ -1.25
RBM42-203ENST00000588161 LCE3BQ5TA77 95 aa7.12□□□□□ -1.27
RBM42-203ENST00000588161 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
RBM42-203ENST00000588161 KRTAP2-3P0C7H8 128 aa7.01□□□□□ -1.29
RBM42-203ENST00000588161 KRTAP2-4Q9BYR9 128 aa7.01□□□□□ -1.29
RBM42-203ENST00000588161 KRTAP20-1Q3LI63 56 aa6.92□□□□□ -1.3
RBM42-203ENST00000588161 KRTAP5-5Q701N2 237 aaPredicted RBP6.89□□□□□ -1.31
RBM42-203ENST00000588161 KRTAP2-2Q9BYT5 123 aa6.86□□□□□ -1.31
RBM42-203ENST00000588161 KRTAP2-1Q9BYU5 128 aa6.86□□□□□ -1.31
RBM42-203ENST00000588161 A0A0A0MQY5 61 aa6.85□□□□□ -1.31
RBM42-203ENST00000588161 MT1AP04731 61 aa6.72□□□□□ -1.33
RBM42-203ENST00000588161 KRTAP5-4Q6L8H1 288 aa6.68□□□□□ -1.34
RBM42-203ENST00000588161 KRTAP6-1Q3LI64 71 aa6.63□□□□□ -1.35
RBM42-203ENST00000588161 LCE4AQ5TA78 99 aa6.61□□□□□ -1.35
RBM42-203ENST00000588161 SYNE1Q8NF91 8797 aaKnown RBP6.49□□□□□ -1.37
RBM42-203ENST00000588161 KRTAP12-4P60329 112 aa6.47□□□□□ -1.37
RBM42-203ENST00000588161 MT4P47944 62 aa6.4□□□□□ -1.38
RBM42-203ENST00000588161 KRTAP9-4Q9BYQ2 154 aa6.4□□□□□ -1.38
RBM42-203ENST00000588161 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
RBM42-203ENST00000588161 INE1O15225 51 aa6.35□□□□□ -1.39
RBM42-203ENST00000588161 LCE1DQ5T752 114 aa6.35□□□□□ -1.39
RBM42-203ENST00000588161 KRTAP4-6Q9BYQ5 205 aa6.35□□□□□ -1.39
RBM42-203ENST00000588161 KRTAP20-2Q3LI61 65 aa6.24□□□□□ -1.41
RBM42-203ENST00000588161 HMCN1Q96RW7 5635 aa6.23□□□□□ -1.41
RBM42-203ENST00000588161 KRTAP6-2Q3LI66 62 aa6.14□□□□□ -1.43
RBM42-203ENST00000588161 MT3P25713 68 aa6.1□□□□□ -1.43
RBM42-203ENST00000588161 KRTAP5-2Q701N4 177 aa6.03□□□□□ -1.44
RBM42-203ENST00000588161 KRTAP5-3Q6L8H2 238 aa6.02□□□□□ -1.45
RBM42-203ENST00000588161 LCE3DQ9BYE3 92 aa5.75□□□□□ -1.49
RBM42-203ENST00000588161 AHNAK2Q8IVF2 5795 aa5.6□□□□□ -1.51
RBM42-203ENST00000588161 LCE3EQ5T5B0 92 aa5.57□□□□□ -1.52
RBM42-203ENST00000588161 OBSCNQ5VST9 7968 aa5.56□□□□□ -1.52
RBM42-203ENST00000588161 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
RBM42-203ENST00000588161 KRTAP5-10Q6L8G5 202 aa5.37□□□□□ -1.55
RBM42-203ENST00000588161 LCE1EQ5T753 118 aa5.37□□□□□ -1.55
RBM42-203ENST00000588161 GPR98Q8WXG9 6306 aa5.28□□□□□ -1.56
RBM42-203ENST00000588161 KRTAP5-8O75690 187 aa5.25□□□□□ -1.57
RBM42-203ENST00000588161 KRTAP5-1Q6L8H4 278 aa5.23□□□□□ -1.57
RBM42-203ENST00000588161 KRTAP5-7Q6L8G8 165 aa5.08□□□□□ -1.6
RBM42-203ENST00000588161 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
RBM42-203ENST00000588161 LCE1CQ5T751 118 aa4.99□□□□□ -1.61
RBM42-203ENST00000588161 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
RBM42-203ENST00000588161 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
RBM42-203ENST00000588161 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
RBM42-203ENST00000588161 PRM1P04553 51 aa4.75□□□□□ -1.65
RBM42-203ENST00000588161 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.66□□□□□ -1.66
RBM42-203ENST00000588161 MUC5BQ9HC84 5762 aaPredicted RBP4.51□□□□□ -1.69
RBM42-203ENST00000588161 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
RBM42-203ENST00000588161 KRTAP21-2Q3LI59 83 aa4.35□□□□□ -1.71
RBM42-203ENST00000588161 AHNAKQ09666 5890 aaKnown RBP4.3□□□□□ -1.72
RBM42-203ENST00000588161 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.74
RBM42-203ENST00000588161 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
RBM42-203ENST00000588161 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
RBM42-203ENST00000588161 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
RBM42-203ENST00000588161 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
RBM42-203ENST00000588161 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
RBM42-203ENST00000588161 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 106.1 ms