RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 SPRR2AP35326 72 aa5.15□□□□□ -1.59
CCDC130-208ENST00000588071 LCE1AQ5T7P2 110 aa5.1□□□□□ -1.59
CCDC130-208ENST00000588071 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
CCDC130-208ENST00000588071 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
CCDC130-208ENST00000588071 MUC12Q9UKN1 5478 aa5.04□□□□□ -1.6
CCDC130-208ENST00000588071 MT1LQ93083 61 aa5.03□□□□□ -1.6
CCDC130-208ENST00000588071 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
CCDC130-208ENST00000588071 NEBP20929 6669 aa5□□□□□ -1.61
CCDC130-208ENST00000588071 MT1GP13640 62 aa5□□□□□ -1.61
CCDC130-208ENST00000588071 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
CCDC130-208ENST00000588071 SPRR2DP22532 72 aa4.97□□□□□ -1.61
CCDC130-208ENST00000588071 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
CCDC130-208ENST00000588071 MDN1Q9NU22 5596 aa4.91□□□□□ -1.62
CCDC130-208ENST00000588071 MT1MQ8N339 61 aa4.9□□□□□ -1.63
CCDC130-208ENST00000588071 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
CCDC130-208ENST00000588071 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
CCDC130-208ENST00000588071 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
CCDC130-208ENST00000588071 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
CCDC130-208ENST00000588071 KRTAP2-3P0C7H8 128 aa4.81□□□□□ -1.64
CCDC130-208ENST00000588071 KRTAP2-4Q9BYR9 128 aa4.81□□□□□ -1.64
CCDC130-208ENST00000588071 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
CCDC130-208ENST00000588071 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
CCDC130-208ENST00000588071 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
CCDC130-208ENST00000588071 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
CCDC130-208ENST00000588071 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
CCDC130-208ENST00000588071 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
CCDC130-208ENST00000588071 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
CCDC130-208ENST00000588071 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
CCDC130-208ENST00000588071 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
CCDC130-208ENST00000588071 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
CCDC130-208ENST00000588071 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
CCDC130-208ENST00000588071 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
CCDC130-208ENST00000588071 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
CCDC130-208ENST00000588071 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
CCDC130-208ENST00000588071 MT4P47944 62 aa4.32□□□□□ -1.72
CCDC130-208ENST00000588071 MT1AP04731 61 aa4.29□□□□□ -1.72
CCDC130-208ENST00000588071 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
CCDC130-208ENST00000588071 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
CCDC130-208ENST00000588071 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
CCDC130-208ENST00000588071 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
CCDC130-208ENST00000588071 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
CCDC130-208ENST00000588071 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.74
CCDC130-208ENST00000588071 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
CCDC130-208ENST00000588071 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
CCDC130-208ENST00000588071 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
CCDC130-208ENST00000588071 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
CCDC130-208ENST00000588071 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
CCDC130-208ENST00000588071 MT3P25713 68 aa3.93□□□□□ -1.78
CCDC130-208ENST00000588071 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
CCDC130-208ENST00000588071 KRTAP5-10Q6L8G5 202 aa3.78□□□□□ -1.8
CCDC130-208ENST00000588071 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.81
CCDC130-208ENST00000588071 INE1O15225 51 aa3.71□□□□□ -1.82
CCDC130-208ENST00000588071 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
CCDC130-208ENST00000588071 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
CCDC130-208ENST00000588071 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
CCDC130-208ENST00000588071 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
CCDC130-208ENST00000588071 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
CCDC130-208ENST00000588071 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
CCDC130-208ENST00000588071 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
CCDC130-208ENST00000588071 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
CCDC130-208ENST00000588071 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
CCDC130-208ENST00000588071 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
CCDC130-208ENST00000588071 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
CCDC130-208ENST00000588071 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
CCDC130-208ENST00000588071 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
CCDC130-208ENST00000588071 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
CCDC130-208ENST00000588071 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
CCDC130-208ENST00000588071 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
CCDC130-208ENST00000588071 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
CCDC130-208ENST00000588071 PRM1P04553 51 aa2.86□□□□□ -1.95
CCDC130-208ENST00000588071 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
CCDC130-208ENST00000588071 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
CCDC130-208ENST00000588071 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
CCDC130-208ENST00000588071 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
CCDC130-208ENST00000588071 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
CCDC130-208ENST00000588071 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
CCDC130-208ENST00000588071 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
CCDC130-208ENST00000588071 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 1275.7 ms