RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 KRTAP4-3Q9BYR4 195 aa7.03□□□□□ -1.28
TRAPPC6A-203ENST00000587818 UQCR11O14957 56 aa7□□□□□ -1.29
TRAPPC6A-203ENST00000587818 LCE1DQ5T752 114 aa6.92□□□□□ -1.3
TRAPPC6A-203ENST00000587818 MT4P47944 62 aa6.88□□□□□ -1.31
TRAPPC6A-203ENST00000587818 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
TRAPPC6A-203ENST00000587818 MIR22HGQ0VDD5 57 aa6.88□□□□□ -1.31
TRAPPC6A-203ENST00000587818 LCE4AQ5TA78 99 aa6.87□□□□□ -1.31
TRAPPC6A-203ENST00000587818 KRTAP4-7Q9BYR0 210 aa6.87□□□□□ -1.31
TRAPPC6A-203ENST00000587818 HMCN1Q96RW7 5635 aa6.78□□□□□ -1.32
TRAPPC6A-203ENST00000587818 PSPHP1O15172 72 aa6.78□□□□□ -1.32
TRAPPC6A-203ENST00000587818 KRTAP5-4Q6L8H1 288 aa6.74□□□□□ -1.33
TRAPPC6A-203ENST00000587818 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
TRAPPC6A-203ENST00000587818 K7ERS5 55 aa6.7□□□□□ -1.34
TRAPPC6A-203ENST00000587818 KRTAP4-6Q9BYQ5 205 aa6.69□□□□□ -1.34
TRAPPC6A-203ENST00000587818 V9GYY9 64 aa6.69□□□□□ -1.34
TRAPPC6A-203ENST00000587818 Q1T7F1 81 aa6.68□□□□□ -1.34
TRAPPC6A-203ENST00000587818 AHNAK2Q8IVF2 5795 aa6.62□□□□□ -1.35
TRAPPC6A-203ENST00000587818 KRTAP5-10Q6L8G5 202 aa6.59□□□□□ -1.35
TRAPPC6A-203ENST00000587818 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
TRAPPC6A-203ENST00000587818 A6NED7 52 aa6.51□□□□□ -1.37
TRAPPC6A-203ENST00000587818 KRTAP5-5Q701N2 237 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC6A-203ENST00000587818 KRTAP5-7Q6L8G8 165 aa6.46□□□□□ -1.38
TRAPPC6A-203ENST00000587818 KRTAP23-1A1A580 65 aa6.44□□□□□ -1.38
TRAPPC6A-203ENST00000587818 KRTAP15-1Q3LI76 137 aa6.43□□□□□ -1.38
TRAPPC6A-203ENST00000587818 KRTAP20-2Q3LI61 65 aa6.39□□□□□ -1.39
TRAPPC6A-203ENST00000587818 KRTAP19-4Q3LI73 84 aa6.37□□□□□ -1.39
TRAPPC6A-203ENST00000587818 CDC42SE1Q9NRR8 79 aa6.36□□□□□ -1.39
TRAPPC6A-203ENST00000587818 SYNE1Q8NF91 8797 aaKnown RBP6.36□□□□□ -1.39
TRAPPC6A-203ENST00000587818 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.39
TRAPPC6A-203ENST00000587818 KRTAP12-4P60329 112 aa6.32□□□□□ -1.4
TRAPPC6A-203ENST00000587818 SPRR5A0A1B0GTR4 108 aa6.31□□□□□ -1.4
TRAPPC6A-203ENST00000587818 ROMO1P60602 79 aa6.29□□□□□ -1.4
TRAPPC6A-203ENST00000587818 RPS28P62857 69 aaKnown RBP6.28□□□□□ -1.4
TRAPPC6A-203ENST00000587818 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
TRAPPC6A-203ENST00000587818 PCP4P48539 62 aa6.19□□□□□ -1.42
TRAPPC6A-203ENST00000587818 KRTAP6-1Q3LI64 71 aa6.06□□□□□ -1.44
TRAPPC6A-203ENST00000587818 MT1AP04731 61 aa6.05□□□□□ -1.44
TRAPPC6A-203ENST00000587818 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
TRAPPC6A-203ENST00000587818 KRTAP5-2Q701N4 177 aa5.9□□□□□ -1.46
TRAPPC6A-203ENST00000587818 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
TRAPPC6A-203ENST00000587818 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
TRAPPC6A-203ENST00000587818 KRTAP6-2Q3LI66 62 aa5.79□□□□□ -1.48
TRAPPC6A-203ENST00000587818 AHNAKQ09666 5890 aaKnown RBP5.74□□□□□ -1.49
TRAPPC6A-203ENST00000587818 KRTAP5-8O75690 187 aa5.65□□□□□ -1.5
TRAPPC6A-203ENST00000587818 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
TRAPPC6A-203ENST00000587818 OBSCNQ5VST9 7968 aa5.6□□□□□ -1.51
TRAPPC6A-203ENST00000587818 MT3P25713 68 aa5.54□□□□□ -1.52
TRAPPC6A-203ENST00000587818 BRK1Q8WUW1 75 aa5.54□□□□□ -1.52
TRAPPC6A-203ENST00000587818 MUC5BQ9HC84 5762 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC6A-203ENST00000587818 KRTAP9-9Q9BYP9 154 aa5.34□□□□□ -1.55
TRAPPC6A-203ENST00000587818 KRTAP5-1Q6L8H4 278 aa5.31□□□□□ -1.56
TRAPPC6A-203ENST00000587818 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
TRAPPC6A-203ENST00000587818 PRAC1Q96KF2 57 aa5.1□□□□□ -1.59
TRAPPC6A-203ENST00000587818 LCE1EQ5T753 118 aa5.03□□□□□ -1.6
TRAPPC6A-203ENST00000587818 LCE1BQ5T7P3 118 aa4.86□□□□□ -1.63
TRAPPC6A-203ENST00000587818 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
TRAPPC6A-203ENST00000587818 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
TRAPPC6A-203ENST00000587818 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
TRAPPC6A-203ENST00000587818 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
TRAPPC6A-203ENST00000587818 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
TRAPPC6A-203ENST00000587818 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
TRAPPC6A-203ENST00000587818 SVIPQ8NHG7 77 aa4.4□□□□□ -1.71
TRAPPC6A-203ENST00000587818 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
TRAPPC6A-203ENST00000587818 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC6A-203ENST00000587818 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
TRAPPC6A-203ENST00000587818 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
TRAPPC6A-203ENST00000587818 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
TRAPPC6A-203ENST00000587818 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
TRAPPC6A-203ENST00000587818 PHGR1C9JFL3 82 aa3.87□□□□□ -1.79
TRAPPC6A-203ENST00000587818 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
TRAPPC6A-203ENST00000587818 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
TRAPPC6A-203ENST00000587818 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
TRAPPC6A-203ENST00000587818 PRM1P04553 51 aa3.25□□□□□ -1.89
TRAPPC6A-203ENST00000587818 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
TRAPPC6A-203ENST00000587818 A0A0A0MQY5 61 aa2.6□□□□□ -1.99
TRAPPC6A-203ENST00000587818 INE1O15225 51 aa2.57□□□□□ -2
TRAPPC6A-203ENST00000587818 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
TRAPPC6A-203ENST00000587818 H3BS24 57 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 81.4 ms