RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 KRTAP19-7Q3SYF9 63 aa6.55□□□□□ -1.36
DDX39A-206ENST00000587730 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
DDX39A-206ENST00000587730 KRTAP6-3Q3LI67 103 aa6.53□□□□□ -1.36
DDX39A-206ENST00000587730 KRTAP9-6A8MVA2 160 aa6.47□□□□□ -1.37
DDX39A-206ENST00000587730 KRTAP2-3P0C7H8 128 aa6.47□□□□□ -1.37
DDX39A-206ENST00000587730 KRTAP2-4Q9BYR9 128 aa6.47□□□□□ -1.37
DDX39A-206ENST00000587730 KRTAP2-1Q9BYU5 128 aa6.47□□□□□ -1.37
DDX39A-206ENST00000587730 MT1LQ93083 61 aa6.41□□□□□ -1.38
DDX39A-206ENST00000587730 KMT2DO14686 5537 aa6.4□□□□□ -1.38
DDX39A-206ENST00000587730 MT1EP04732 61 aa6.4□□□□□ -1.38
DDX39A-206ENST00000587730 NEBP20929 6669 aa6.33□□□□□ -1.4
DDX39A-206ENST00000587730 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
DDX39A-206ENST00000587730 MUC12Q9UKN1 5478 aa6.24□□□□□ -1.41
DDX39A-206ENST00000587730 KRTAP5-9P26371 169 aa6.14□□□□□ -1.43
DDX39A-206ENST00000587730 KRTAP20-1Q3LI63 56 aa6.14□□□□□ -1.43
DDX39A-206ENST00000587730 MDN1Q9NU22 5596 aa6.06□□□□□ -1.44
DDX39A-206ENST00000587730 MT1GP13640 62 aa6.03□□□□□ -1.44
DDX39A-206ENST00000587730 KRTAP19-3Q7Z4W3 81 aa5.99□□□□□ -1.45
DDX39A-206ENST00000587730 MT1MQ8N339 61 aa5.97□□□□□ -1.45
DDX39A-206ENST00000587730 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
DDX39A-206ENST00000587730 SPRR2EP22531 72 aa5.89□□□□□ -1.47
DDX39A-206ENST00000587730 SPRR2BP35325 72 aa5.89□□□□□ -1.47
DDX39A-206ENST00000587730 SPRR2AP35326 72 aa5.89□□□□□ -1.47
DDX39A-206ENST00000587730 LOC100996750A0A140TA64 210 aa5.85□□□□□ -1.47
DDX39A-206ENST00000587730 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
DDX39A-206ENST00000587730 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
DDX39A-206ENST00000587730 LCE5AQ5TCM9 118 aa5.76□□□□□ -1.49
DDX39A-206ENST00000587730 KRTAP2-2Q9BYT5 123 aa5.73□□□□□ -1.49
DDX39A-206ENST00000587730 SPRR2DP22532 72 aa5.69□□□□□ -1.5
DDX39A-206ENST00000587730 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
DDX39A-206ENST00000587730 MT1AP04731 61 aa5.58□□□□□ -1.52
DDX39A-206ENST00000587730 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
DDX39A-206ENST00000587730 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
DDX39A-206ENST00000587730 KRTAP6-1Q3LI64 71 aa5.37□□□□□ -1.55
DDX39A-206ENST00000587730 LCE3DQ9BYE3 92 aa5.33□□□□□ -1.56
DDX39A-206ENST00000587730 LCE3EQ5T5B0 92 aa5.29□□□□□ -1.56
DDX39A-206ENST00000587730 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
DDX39A-206ENST00000587730 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
DDX39A-206ENST00000587730 GPR98Q8WXG9 6306 aa5.25□□□□□ -1.57
DDX39A-206ENST00000587730 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
DDX39A-206ENST00000587730 MT3P25713 68 aa5.13□□□□□ -1.59
DDX39A-206ENST00000587730 LCE1FQ5T754 118 aa5.09□□□□□ -1.6
DDX39A-206ENST00000587730 LCE1DQ5T752 114 aa5.08□□□□□ -1.6
DDX39A-206ENST00000587730 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
DDX39A-206ENST00000587730 MT4P47944 62 aa5.01□□□□□ -1.61
DDX39A-206ENST00000587730 PRM1P04553 51 aa5□□□□□ -1.61
DDX39A-206ENST00000587730 LCE4AQ5TA78 99 aa5□□□□□ -1.61
DDX39A-206ENST00000587730 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
DDX39A-206ENST00000587730 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
DDX39A-206ENST00000587730 AHNAK2Q8IVF2 5795 aa4.85□□□□□ -1.63
DDX39A-206ENST00000587730 KRTAP4-6Q9BYQ5 205 aa4.85□□□□□ -1.63
DDX39A-206ENST00000587730 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
DDX39A-206ENST00000587730 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
DDX39A-206ENST00000587730 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
DDX39A-206ENST00000587730 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
DDX39A-206ENST00000587730 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
DDX39A-206ENST00000587730 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.67
DDX39A-206ENST00000587730 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
DDX39A-206ENST00000587730 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
DDX39A-206ENST00000587730 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
DDX39A-206ENST00000587730 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
DDX39A-206ENST00000587730 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
DDX39A-206ENST00000587730 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
DDX39A-206ENST00000587730 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
DDX39A-206ENST00000587730 MUC5BQ9HC84 5762 aaPredicted RBP4.03□□□□□ -1.76
DDX39A-206ENST00000587730 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
DDX39A-206ENST00000587730 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
DDX39A-206ENST00000587730 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
DDX39A-206ENST00000587730 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
DDX39A-206ENST00000587730 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
DDX39A-206ENST00000587730 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
DDX39A-206ENST00000587730 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
DDX39A-206ENST00000587730 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
DDX39A-206ENST00000587730 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
DDX39A-206ENST00000587730 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
DDX39A-206ENST00000587730 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
DDX39A-206ENST00000587730 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
DDX39A-206ENST00000587730 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms