RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 KRTAP2-2Q9BYT5 123 aa2.57□□□□□ -2
NPC1-206ENST00000587223 RPS28P62857 69 aaKnown RBP2.56□□□□□ -2
NPC1-206ENST00000587223 KMT2DO14686 5537 aa2.52□□□□□ -2.01
NPC1-206ENST00000587223 K7ERS5 55 aa2.52□□□□□ -2.01
NPC1-206ENST00000587223 SPRR2EP22531 72 aa2.51□□□□□ -2.01
NPC1-206ENST00000587223 SPRR2BP35325 72 aa2.51□□□□□ -2.01
NPC1-206ENST00000587223 SPRR2AP35326 72 aa2.51□□□□□ -2.01
NPC1-206ENST00000587223 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
NPC1-206ENST00000587223 C10orf95Q9H7T3 257 aa2.51□□□□□ -2.01
NPC1-206ENST00000587223 A6NED7 52 aa2.5□□□□□ -2.01
NPC1-206ENST00000587223 TNP1P09430 55 aa2.5□□□□□ -2.01
NPC1-206ENST00000587223 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
NPC1-206ENST00000587223 MUC12Q9UKN1 5478 aa2.46□□□□□ -2.02
NPC1-206ENST00000587223 NEBP20929 6669 aa2.45□□□□□ -2.02
NPC1-206ENST00000587223 KRTAP20-1Q3LI63 56 aa2.45□□□□□ -2.02
NPC1-206ENST00000587223 KRTAP19-7Q3SYF9 63 aa2.44□□□□□ -2.02
NPC1-206ENST00000587223 KRTAP2-3P0C7H8 128 aa2.43□□□□□ -2.02
NPC1-206ENST00000587223 KRTAP19-5Q3LI72 72 aa2.43□□□□□ -2.02
NPC1-206ENST00000587223 KRTAP2-4Q9BYR9 128 aa2.43□□□□□ -2.02
NPC1-206ENST00000587223 MT1EP04732 61 aa2.42□□□□□ -2.02
NPC1-206ENST00000587223 SPRR2DP22532 72 aa2.42□□□□□ -2.02
NPC1-206ENST00000587223 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
NPC1-206ENST00000587223 KRTAP25-1Q3LHN0 102 aa2.41□□□□□ -2.02
NPC1-206ENST00000587223 CDC42SE1Q9NRR8 79 aa2.4□□□□□ -2.03
NPC1-206ENST00000587223 MDN1Q9NU22 5596 aa2.4□□□□□ -2.03
NPC1-206ENST00000587223 KRTAP19-3Q7Z4W3 81 aa2.38□□□□□ -2.03
NPC1-206ENST00000587223 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
NPC1-206ENST00000587223 MT1GP13640 62 aa2.35□□□□□ -2.03
NPC1-206ENST00000587223 KRTAP12-3P60328 96 aa2.34□□□□□ -2.03
NPC1-206ENST00000587223 ROMO1P60602 79 aa2.34□□□□□ -2.03
NPC1-206ENST00000587223 PP632Q6XCG6 107 aa2.34□□□□□ -2.03
NPC1-206ENST00000587223 MT1LQ93083 61 aa2.33□□□□□ -2.04
NPC1-206ENST00000587223 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
NPC1-206ENST00000587223 MT1MQ8N339 61 aa2.3□□□□□ -2.04
NPC1-206ENST00000587223 BRK1Q8WUW1 75 aa2.27□□□□□ -2.05
NPC1-206ENST00000587223 KRTAP4-3Q9BYR4 195 aa2.24□□□□□ -2.05
NPC1-206ENST00000587223 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
NPC1-206ENST00000587223 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
NPC1-206ENST00000587223 PMAIP1Q13794 54 aa2.16□□□□□ -2.06
NPC1-206ENST00000587223 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.07
NPC1-206ENST00000587223 LCE1EQ5T753 118 aa2.14□□□□□ -2.07
NPC1-206ENST00000587223 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
NPC1-206ENST00000587223 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
NPC1-206ENST00000587223 MT4P47944 62 aa2.12□□□□□ -2.07
NPC1-206ENST00000587223 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
NPC1-206ENST00000587223 PRO0628Q9UI54 55 aa2.09□□□□□ -2.07
NPC1-206ENST00000587223 LUZP6Q538Z0 58 aa2.07□□□□□ -2.08
NPC1-206ENST00000587223 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
NPC1-206ENST00000587223 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
NPC1-206ENST00000587223 KRTAP9-6A8MVA2 160 aa2.01□□□□□ -2.09
NPC1-206ENST00000587223 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
NPC1-206ENST00000587223 MT1AP04731 61 aa1.99□□□□□ -2.09
NPC1-206ENST00000587223 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
NPC1-206ENST00000587223 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
NPC1-206ENST00000587223 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
NPC1-206ENST00000587223 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
NPC1-206ENST00000587223 KTN1-AS1Q86SY8 53 aa1.95□□□□□ -2.1
NPC1-206ENST00000587223 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
NPC1-206ENST00000587223 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
NPC1-206ENST00000587223 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
NPC1-206ENST00000587223 AHNAK2Q8IVF2 5795 aa1.87□□□□□ -2.11
NPC1-206ENST00000587223 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
NPC1-206ENST00000587223 LCE3DQ9BYE3 92 aa1.83□□□□□ -2.12
NPC1-206ENST00000587223 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
NPC1-206ENST00000587223 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
NPC1-206ENST00000587223 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
NPC1-206ENST00000587223 LCE1BQ5T7P3 118 aa1.56□□□□□ -2.16
NPC1-206ENST00000587223 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
NPC1-206ENST00000587223 LCE1CQ5T751 118 aa1.52□□□□□ -2.17
NPC1-206ENST00000587223 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
NPC1-206ENST00000587223 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
NPC1-206ENST00000587223 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
NPC1-206ENST00000587223 INE1O15225 51 aa1.26□□□□□ -2.21
NPC1-206ENST00000587223 PRM1P04553 51 aa1.2□□□□□ -2.22
NPC1-206ENST00000587223 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
NPC1-206ENST00000587223 MUC19Q7Z5P9 8384 aa1.05□□□□□ -2.24
NPC1-206ENST00000587223 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
NPC1-206ENST00000587223 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 40.3 ms