RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 KRTAP20-2Q3LI61 65 aa5.51□□□□□ -1.53
NPC1-205ENST00000587163 SERP1Q9Y6X1 66 aa5.51□□□□□ -1.53
NPC1-205ENST00000587163 A0A1B0GU33 70 aa5.49□□□□□ -1.53
NPC1-205ENST00000587163 SEC61GP60059 68 aa5.49□□□□□ -1.53
NPC1-205ENST00000587163 COA5Q86WW8 74 aa5.47□□□□□ -1.53
NPC1-205ENST00000587163 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
NPC1-205ENST00000587163 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
NPC1-205ENST00000587163 KRTAP5-5Q701N2 237 aaPredicted RBP5.4□□□□□ -1.54
NPC1-205ENST00000587163 TNP1P09430 55 aa5.39□□□□□ -1.55
NPC1-205ENST00000587163 A8MU10 97 aa5.34□□□□□ -1.55
NPC1-205ENST00000587163 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
NPC1-205ENST00000587163 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
NPC1-205ENST00000587163 SERP2Q8N6R1 65 aa5.31□□□□□ -1.56
NPC1-205ENST00000587163 SMIM26A0A096LP01 95 aa5.3□□□□□ -1.56
NPC1-205ENST00000587163 K7ERU9 68 aa5.21□□□□□ -1.58
NPC1-205ENST00000587163 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.58
NPC1-205ENST00000587163 A0A1B0GU69 56 aa5.18□□□□□ -1.58
NPC1-205ENST00000587163 H7BZZ5 65 aa5.07□□□□□ -1.6
NPC1-205ENST00000587163 COX7CP15954 63 aa5.02□□□□□ -1.61
NPC1-205ENST00000587163 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
NPC1-205ENST00000587163 KRTAP5-8O75690 187 aa4.97□□□□□ -1.61
NPC1-205ENST00000587163 MUC5ACP98088 5654 aa4.93□□□□□ -1.62
NPC1-205ENST00000587163 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
NPC1-205ENST00000587163 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.62
NPC1-205ENST00000587163 MT1AP04731 61 aa4.89□□□□□ -1.63
NPC1-205ENST00000587163 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
NPC1-205ENST00000587163 MUC5BQ9HC84 5762 aaPredicted RBP4.88□□□□□ -1.63
NPC1-205ENST00000587163 PRR15LQ9BU68 103 aa4.87□□□□□ -1.63
NPC1-205ENST00000587163 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
NPC1-205ENST00000587163 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
NPC1-205ENST00000587163 OBSCNQ5VST9 7968 aa4.83□□□□□ -1.64
NPC1-205ENST00000587163 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.81□□□□□ -1.64
NPC1-205ENST00000587163 KRTAP6-2Q3LI66 62 aa4.78□□□□□ -1.64
NPC1-205ENST00000587163 LINC01558Q9Y6Z2 57 aa4.78□□□□□ -1.64
NPC1-205ENST00000587163 UQCR11O14957 56 aa4.72□□□□□ -1.65
NPC1-205ENST00000587163 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
NPC1-205ENST00000587163 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.67
NPC1-205ENST00000587163 MIR22HGQ0VDD5 57 aa4.59□□□□□ -1.67
NPC1-205ENST00000587163 KRTAP5-1Q6L8H4 278 aa4.59□□□□□ -1.67
NPC1-205ENST00000587163 ANAPC13Q9BS18 74 aa4.59□□□□□ -1.67
NPC1-205ENST00000587163 CCDC179H3BU77 68 aa4.58□□□□□ -1.68
NPC1-205ENST00000587163 H3BS24 57 aa4.56□□□□□ -1.68
NPC1-205ENST00000587163 ATP5EP56381 51 aaPredicted RBP4.56□□□□□ -1.68
NPC1-205ENST00000587163 K7ERS5 55 aa4.53□□□□□ -1.68
NPC1-205ENST00000587163 MT3P25713 68 aa4.48□□□□□ -1.69
NPC1-205ENST00000587163 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
NPC1-205ENST00000587163 RPS28P62857 69 aaKnown RBP4.32□□□□□ -1.72
NPC1-205ENST00000587163 TMEM258P61165 79 aa4.3□□□□□ -1.72
NPC1-205ENST00000587163 PSPHP1O15172 72 aa4.29□□□□□ -1.72
NPC1-205ENST00000587163 Q1T7F1 81 aa4.27□□□□□ -1.73
NPC1-205ENST00000587163 CDC42SE1Q9NRR8 79 aa4.26□□□□□ -1.73
NPC1-205ENST00000587163 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
NPC1-205ENST00000587163 ROMO1P60602 79 aa4.19□□□□□ -1.74
NPC1-205ENST00000587163 PCP4P48539 62 aa4.15□□□□□ -1.75
NPC1-205ENST00000587163 V9GYY9 64 aa4.14□□□□□ -1.75
NPC1-205ENST00000587163 A6NED7 52 aa4.09□□□□□ -1.75
NPC1-205ENST00000587163 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
NPC1-205ENST00000587163 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
NPC1-205ENST00000587163 LCE1CQ5T751 118 aa3.91□□□□□ -1.78
NPC1-205ENST00000587163 SVIPQ8NHG7 77 aa3.78□□□□□ -1.8
NPC1-205ENST00000587163 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
NPC1-205ENST00000587163 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
NPC1-205ENST00000587163 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
NPC1-205ENST00000587163 PRO0628Q9UI54 55 aa3.35□□□□□ -1.87
NPC1-205ENST00000587163 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
NPC1-205ENST00000587163 BRK1Q8WUW1 75 aa3.24□□□□□ -1.89
NPC1-205ENST00000587163 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
NPC1-205ENST00000587163 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
NPC1-205ENST00000587163 KTN1-AS1Q86SY8 53 aa3.06□□□□□ -1.92
NPC1-205ENST00000587163 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
NPC1-205ENST00000587163 PRAC1Q96KF2 57 aa2.88□□□□□ -1.95
NPC1-205ENST00000587163 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
NPC1-205ENST00000587163 NDUFAF8A1L188 74 aa2.41□□□□□ -2.02
NPC1-205ENST00000587163 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
NPC1-205ENST00000587163 A0A0A0MQY5 61 aa2.19□□□□□ -2.06
NPC1-205ENST00000587163 PRM1P04553 51 aa2.13□□□□□ -2.07
NPC1-205ENST00000587163 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
NPC1-205ENST00000587163 INE1O15225 51 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 73.6 ms