RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
CALR-204ENST00000586967 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.55
CALR-204ENST00000586967 SPRR2EP22531 72 aa5.33□□□□□ -1.56
CALR-204ENST00000586967 SPRR2BP35325 72 aa5.33□□□□□ -1.56
CALR-204ENST00000586967 SPRR2AP35326 72 aa5.33□□□□□ -1.56
CALR-204ENST00000586967 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
CALR-204ENST00000586967 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
CALR-204ENST00000586967 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
CALR-204ENST00000586967 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
CALR-204ENST00000586967 MT1LQ93083 61 aa5.26□□□□□ -1.57
CALR-204ENST00000586967 MT1GP13640 62 aa5.24□□□□□ -1.57
CALR-204ENST00000586967 KRTAP20-1Q3LI63 56 aa5.24□□□□□ -1.57
CALR-204ENST00000586967 LCE5AQ5TCM9 118 aa5.2□□□□□ -1.58
CALR-204ENST00000586967 SPRR2DP22532 72 aa5.15□□□□□ -1.59
CALR-204ENST00000586967 MDN1Q9NU22 5596 aa5.14□□□□□ -1.59
CALR-204ENST00000586967 MT1MQ8N339 61 aa5.11□□□□□ -1.59
CALR-204ENST00000586967 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
CALR-204ENST00000586967 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
CALR-204ENST00000586967 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
CALR-204ENST00000586967 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
CALR-204ENST00000586967 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
CALR-204ENST00000586967 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
CALR-204ENST00000586967 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
CALR-204ENST00000586967 KRTAP2-1Q9BYU5 128 aa4.89□□□□□ -1.63
CALR-204ENST00000586967 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
CALR-204ENST00000586967 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
CALR-204ENST00000586967 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
CALR-204ENST00000586967 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
CALR-204ENST00000586967 LUZP6Q538Z0 58 aa4.61□□□□□ -1.67
CALR-204ENST00000586967 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
CALR-204ENST00000586967 KRTAP5-4Q6L8H1 288 aa4.56□□□□□ -1.68
CALR-204ENST00000586967 MT1AP04731 61 aa4.51□□□□□ -1.69
CALR-204ENST00000586967 H3BS24 57 aa4.49□□□□□ -1.69
CALR-204ENST00000586967 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
CALR-204ENST00000586967 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
CALR-204ENST00000586967 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
CALR-204ENST00000586967 MT4P47944 62 aa4.42□□□□□ -1.7
CALR-204ENST00000586967 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.71
CALR-204ENST00000586967 LCE1DQ5T752 114 aa4.4□□□□□ -1.71
CALR-204ENST00000586967 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
CALR-204ENST00000586967 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
CALR-204ENST00000586967 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
CALR-204ENST00000586967 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
CALR-204ENST00000586967 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
CALR-204ENST00000586967 HMCN1Q96RW7 5635 aa4.21□□□□□ -1.73
CALR-204ENST00000586967 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
CALR-204ENST00000586967 MT3P25713 68 aa4.14□□□□□ -1.75
CALR-204ENST00000586967 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
CALR-204ENST00000586967 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
CALR-204ENST00000586967 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
CALR-204ENST00000586967 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
CALR-204ENST00000586967 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
CALR-204ENST00000586967 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
CALR-204ENST00000586967 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
CALR-204ENST00000586967 KRTAP5-7Q6L8G8 165 aa3.96□□□□□ -1.78
CALR-204ENST00000586967 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
CALR-204ENST00000586967 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
CALR-204ENST00000586967 INE1O15225 51 aa3.71□□□□□ -1.82
CALR-204ENST00000586967 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
CALR-204ENST00000586967 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
CALR-204ENST00000586967 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
CALR-204ENST00000586967 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
CALR-204ENST00000586967 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
CALR-204ENST00000586967 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
CALR-204ENST00000586967 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
CALR-204ENST00000586967 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
CALR-204ENST00000586967 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
CALR-204ENST00000586967 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
CALR-204ENST00000586967 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
CALR-204ENST00000586967 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
CALR-204ENST00000586967 PRM1P04553 51 aa3.01□□□□□ -1.93
CALR-204ENST00000586967 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
CALR-204ENST00000586967 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
CALR-204ENST00000586967 PHGR1C9JFL3 82 aa2.58□□□□□ -2
CALR-204ENST00000586967 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
CALR-204ENST00000586967 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
CALR-204ENST00000586967 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
CALR-204ENST00000586967 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 119.6 ms