RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 KRTAP5-4Q6L8H1 288 aa6.78□□□□□ -1.32
TRAF4-216ENST00000586813 KRTAP4-3Q9BYR4 195 aa6.77□□□□□ -1.33
TRAF4-216ENST00000586813 LINC01558Q9Y6Z2 57 aa6.74□□□□□ -1.33
TRAF4-216ENST00000586813 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
TRAF4-216ENST00000586813 KRTAP5-10Q6L8G5 202 aa6.71□□□□□ -1.34
TRAF4-216ENST00000586813 A8MU10 97 aa6.7□□□□□ -1.34
TRAF4-216ENST00000586813 LCE3AQ5TA76 89 aa6.7□□□□□ -1.34
TRAF4-216ENST00000586813 KRTAP4-6Q9BYQ5 205 aa6.7□□□□□ -1.34
TRAF4-216ENST00000586813 TNP1P09430 55 aa6.62□□□□□ -1.35
TRAF4-216ENST00000586813 UQCR11O14957 56 aa6.61□□□□□ -1.35
TRAF4-216ENST00000586813 V9GYY9 64 aa6.55□□□□□ -1.36
TRAF4-216ENST00000586813 KRTAP4-7Q9BYR0 210 aa6.51□□□□□ -1.37
TRAF4-216ENST00000586813 KRTAP5-7Q6L8G8 165 aa6.49□□□□□ -1.37
TRAF4-216ENST00000586813 KRTAP5-3Q6L8H2 238 aa6.48□□□□□ -1.37
TRAF4-216ENST00000586813 MIR22HGQ0VDD5 57 aa6.47□□□□□ -1.37
TRAF4-216ENST00000586813 PSPHP1O15172 72 aa6.45□□□□□ -1.38
TRAF4-216ENST00000586813 KRTAP12-3P60328 96 aa6.44□□□□□ -1.38
TRAF4-216ENST00000586813 Q1T7F1 81 aa6.43□□□□□ -1.38
TRAF4-216ENST00000586813 KRTAP20-2Q3LI61 65 aa6.42□□□□□ -1.38
TRAF4-216ENST00000586813 K7ERS5 55 aa6.4□□□□□ -1.38
TRAF4-216ENST00000586813 PCP4P48539 62 aa6.38□□□□□ -1.39
TRAF4-216ENST00000586813 KRTAP5-5Q701N2 237 aaPredicted RBP6.38□□□□□ -1.39
TRAF4-216ENST00000586813 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
TRAF4-216ENST00000586813 A6NED7 52 aa6.28□□□□□ -1.4
TRAF4-216ENST00000586813 KRTAP12-4P60329 112 aa6.27□□□□□ -1.41
TRAF4-216ENST00000586813 RPS28P62857 69 aaKnown RBP6.26□□□□□ -1.41
TRAF4-216ENST00000586813 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
TRAF4-216ENST00000586813 KRTAP25-1Q3LHN0 102 aa6.16□□□□□ -1.42
TRAF4-216ENST00000586813 SYNE1Q8NF91 8797 aaKnown RBP6.15□□□□□ -1.42
TRAF4-216ENST00000586813 CDC42SE1Q9NRR8 79 aa6.04□□□□□ -1.44
TRAF4-216ENST00000586813 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
TRAF4-216ENST00000586813 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
TRAF4-216ENST00000586813 ROMO1P60602 79 aa5.92□□□□□ -1.46
TRAF4-216ENST00000586813 KRTAP23-1A1A580 65 aa5.9□□□□□ -1.46
TRAF4-216ENST00000586813 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
TRAF4-216ENST00000586813 KRTAP5-2Q701N4 177 aa5.9□□□□□ -1.46
TRAF4-216ENST00000586813 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
TRAF4-216ENST00000586813 MT1AP04731 61 aa5.83□□□□□ -1.48
TRAF4-216ENST00000586813 KRTAP6-1Q3LI64 71 aa5.82□□□□□ -1.48
TRAF4-216ENST00000586813 KRTAP5-8O75690 187 aa5.74□□□□□ -1.49
TRAF4-216ENST00000586813 AHNAKQ09666 5890 aaKnown RBP5.72□□□□□ -1.49
TRAF4-216ENST00000586813 MUC5ACP98088 5654 aa5.72□□□□□ -1.49
TRAF4-216ENST00000586813 SVIPQ8NHG7 77 aa5.67□□□□□ -1.5
TRAF4-216ENST00000586813 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
TRAF4-216ENST00000586813 MUC5BQ9HC84 5762 aaPredicted RBP5.65□□□□□ -1.51
TRAF4-216ENST00000586813 KRTAP6-2Q3LI66 62 aa5.62□□□□□ -1.51
TRAF4-216ENST00000586813 BRK1Q8WUW1 75 aa5.61□□□□□ -1.51
TRAF4-216ENST00000586813 OBSCNQ5VST9 7968 aa5.61□□□□□ -1.51
TRAF4-216ENST00000586813 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
TRAF4-216ENST00000586813 KRTAP9-9Q9BYP9 154 aa5.49□□□□□ -1.53
TRAF4-216ENST00000586813 MT3P25713 68 aa5.34□□□□□ -1.55
TRAF4-216ENST00000586813 KRTAP5-1Q6L8H4 278 aa5.34□□□□□ -1.55
TRAF4-216ENST00000586813 PMAIP1Q13794 54 aa5.28□□□□□ -1.56
TRAF4-216ENST00000586813 PRO0628Q9UI54 55 aa5.12□□□□□ -1.59
TRAF4-216ENST00000586813 LCE1EQ5T753 118 aa4.99□□□□□ -1.61
TRAF4-216ENST00000586813 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
TRAF4-216ENST00000586813 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
TRAF4-216ENST00000586813 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
TRAF4-216ENST00000586813 LCE1BQ5T7P3 118 aa4.72□□□□□ -1.65
TRAF4-216ENST00000586813 LCE1CQ5T751 118 aa4.63□□□□□ -1.67
TRAF4-216ENST00000586813 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
TRAF4-216ENST00000586813 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
TRAF4-216ENST00000586813 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
TRAF4-216ENST00000586813 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
TRAF4-216ENST00000586813 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
TRAF4-216ENST00000586813 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
TRAF4-216ENST00000586813 PHGR1C9JFL3 82 aa3.92□□□□□ -1.78
TRAF4-216ENST00000586813 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
TRAF4-216ENST00000586813 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
TRAF4-216ENST00000586813 H3BS24 57 aa3.83□□□□□ -1.8
TRAF4-216ENST00000586813 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
TRAF4-216ENST00000586813 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
TRAF4-216ENST00000586813 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.85
TRAF4-216ENST00000586813 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
TRAF4-216ENST00000586813 INE1O15225 51 aa3.21□□□□□ -1.9
TRAF4-216ENST00000586813 PRM1P04553 51 aa3.03□□□□□ -1.92
TRAF4-216ENST00000586813 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
TRAF4-216ENST00000586813 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 8.2 ms