RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
NPC1-204ENST00000586718 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
NPC1-204ENST00000586718 KRTAP6-3Q3LI67 103 aa3.09□□□□□ -1.91
NPC1-204ENST00000586718 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
NPC1-204ENST00000586718 KRTAP19-4Q3LI73 84 aa3.05□□□□□ -1.92
NPC1-204ENST00000586718 LCE3BQ5TA77 95 aa3.04□□□□□ -1.92
NPC1-204ENST00000586718 MT1LQ93083 61 aa3.04□□□□□ -1.92
NPC1-204ENST00000586718 KRTAP19-3Q7Z4W3 81 aa3.03□□□□□ -1.92
NPC1-204ENST00000586718 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
NPC1-204ENST00000586718 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
NPC1-204ENST00000586718 SPRR2EP22531 72 aa3□□□□□ -1.93
NPC1-204ENST00000586718 SPRR2BP35325 72 aa3□□□□□ -1.93
NPC1-204ENST00000586718 SPRR2AP35326 72 aa3□□□□□ -1.93
NPC1-204ENST00000586718 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
NPC1-204ENST00000586718 MT1GP13640 62 aa2.99□□□□□ -1.93
NPC1-204ENST00000586718 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
NPC1-204ENST00000586718 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
NPC1-204ENST00000586718 NEBP20929 6669 aa2.96□□□□□ -1.93
NPC1-204ENST00000586718 LCE5AQ5TCM9 118 aa2.95□□□□□ -1.94
NPC1-204ENST00000586718 MT1MQ8N339 61 aa2.95□□□□□ -1.94
NPC1-204ENST00000586718 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
NPC1-204ENST00000586718 KRTAP4-7Q9BYR0 210 aa2.94□□□□□ -1.94
NPC1-204ENST00000586718 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
NPC1-204ENST00000586718 SPRR2DP22532 72 aa2.9□□□□□ -1.95
NPC1-204ENST00000586718 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
NPC1-204ENST00000586718 LCE1DQ5T752 114 aa2.84□□□□□ -1.95
NPC1-204ENST00000586718 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
NPC1-204ENST00000586718 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
NPC1-204ENST00000586718 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
NPC1-204ENST00000586718 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
NPC1-204ENST00000586718 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
NPC1-204ENST00000586718 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
NPC1-204ENST00000586718 DSTQ03001 7570 aaKnown RBP2.77□□□□□ -1.97
NPC1-204ENST00000586718 KRTAP9-6A8MVA2 160 aa2.75□□□□□ -1.97
NPC1-204ENST00000586718 KRTAP5-3Q6L8H2 238 aa2.75□□□□□ -1.97
NPC1-204ENST00000586718 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
NPC1-204ENST00000586718 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
NPC1-204ENST00000586718 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
NPC1-204ENST00000586718 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.99
NPC1-204ENST00000586718 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
NPC1-204ENST00000586718 MT1AP04731 61 aa2.61□□□□□ -1.99
NPC1-204ENST00000586718 LCE4AQ5TA78 99 aa2.58□□□□□ -2
NPC1-204ENST00000586718 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
NPC1-204ENST00000586718 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
NPC1-204ENST00000586718 KRTAP12-4P60329 112 aa2.53□□□□□ -2
NPC1-204ENST00000586718 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
NPC1-204ENST00000586718 SYNE1Q8NF91 8797 aaKnown RBP2.51□□□□□ -2.01
NPC1-204ENST00000586718 MT4P47944 62 aa2.49□□□□□ -2.01
NPC1-204ENST00000586718 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
NPC1-204ENST00000586718 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
NPC1-204ENST00000586718 MT3P25713 68 aa2.38□□□□□ -2.03
NPC1-204ENST00000586718 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
NPC1-204ENST00000586718 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
NPC1-204ENST00000586718 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
NPC1-204ENST00000586718 INE1O15225 51 aa2.26□□□□□ -2.05
NPC1-204ENST00000586718 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
NPC1-204ENST00000586718 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
NPC1-204ENST00000586718 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
NPC1-204ENST00000586718 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
NPC1-204ENST00000586718 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
NPC1-204ENST00000586718 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
NPC1-204ENST00000586718 LCE1EQ5T753 118 aa2.07□□□□□ -2.08
NPC1-204ENST00000586718 KRTAP5-8O75690 187 aa2□□□□□ -2.09
NPC1-204ENST00000586718 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
NPC1-204ENST00000586718 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
NPC1-204ENST00000586718 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
NPC1-204ENST00000586718 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
NPC1-204ENST00000586718 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
NPC1-204ENST00000586718 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
NPC1-204ENST00000586718 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
NPC1-204ENST00000586718 PRM1P04553 51 aa1.85□□□□□ -2.11
NPC1-204ENST00000586718 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
NPC1-204ENST00000586718 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
NPC1-204ENST00000586718 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
NPC1-204ENST00000586718 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
NPC1-204ENST00000586718 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
NPC1-204ENST00000586718 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
NPC1-204ENST00000586718 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 124.1 ms