RNA–Protein interactions for RNA: ENST00000585934.1

TRAPPC6A-202, Transcript of trafficking protein particle complex 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC6A, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-202ENST00000585934 MT1MQ8N339 61 aa5.8□□□□□ -1.48
TRAPPC6A-202ENST00000585934 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
TRAPPC6A-202ENST00000585934 Q1T7F1 81 aa5.74□□□□□ -1.49
TRAPPC6A-202ENST00000585934 MIR22HGQ0VDD5 57 aa5.71□□□□□ -1.5
TRAPPC6A-202ENST00000585934 GPR98Q8WXG9 6306 aa5.71□□□□□ -1.5
TRAPPC6A-202ENST00000585934 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
TRAPPC6A-202ENST00000585934 K7ERS5 55 aa5.65□□□□□ -1.5
TRAPPC6A-202ENST00000585934 PSPHP1O15172 72 aa5.65□□□□□ -1.5
TRAPPC6A-202ENST00000585934 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.5
TRAPPC6A-202ENST00000585934 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
TRAPPC6A-202ENST00000585934 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
TRAPPC6A-202ENST00000585934 KRTAP25-1Q3LHN0 102 aa5.6□□□□□ -1.51
TRAPPC6A-202ENST00000585934 MT4P47944 62 aa5.59□□□□□ -1.51
TRAPPC6A-202ENST00000585934 HMCN1Q96RW7 5635 aa5.56□□□□□ -1.52
TRAPPC6A-202ENST00000585934 A6NED7 52 aa5.54□□□□□ -1.52
TRAPPC6A-202ENST00000585934 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
TRAPPC6A-202ENST00000585934 KRTAP5-4Q6L8H1 288 aa5.49□□□□□ -1.53
TRAPPC6A-202ENST00000585934 AHNAK2Q8IVF2 5795 aa5.41□□□□□ -1.54
TRAPPC6A-202ENST00000585934 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
TRAPPC6A-202ENST00000585934 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
TRAPPC6A-202ENST00000585934 CDC42SE1Q9NRR8 79 aa5.35□□□□□ -1.55
TRAPPC6A-202ENST00000585934 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
TRAPPC6A-202ENST00000585934 KRTAP5-5Q701N2 237 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC6A-202ENST00000585934 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
TRAPPC6A-202ENST00000585934 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
TRAPPC6A-202ENST00000585934 ROMO1P60602 79 aa5.22□□□□□ -1.57
TRAPPC6A-202ENST00000585934 KRTAP20-2Q3LI61 65 aa5.21□□□□□ -1.58
TRAPPC6A-202ENST00000585934 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
TRAPPC6A-202ENST00000585934 LCE3CQ5T5A8 94 aa5.19□□□□□ -1.58
TRAPPC6A-202ENST00000585934 KRTAP5-10Q6L8G5 202 aa5.19□□□□□ -1.58
TRAPPC6A-202ENST00000585934 BRK1Q8WUW1 75 aa5.19□□□□□ -1.58
TRAPPC6A-202ENST00000585934 SPRR5A0A1B0GTR4 108 aa5.18□□□□□ -1.58
TRAPPC6A-202ENST00000585934 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
TRAPPC6A-202ENST00000585934 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.59
TRAPPC6A-202ENST00000585934 KRTAP5-7Q6L8G8 165 aa4.99□□□□□ -1.61
TRAPPC6A-202ENST00000585934 MT1AP04731 61 aa4.96□□□□□ -1.62
TRAPPC6A-202ENST00000585934 PMAIP1Q13794 54 aa4.94□□□□□ -1.62
TRAPPC6A-202ENST00000585934 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
TRAPPC6A-202ENST00000585934 PRO0628Q9UI54 55 aa4.89□□□□□ -1.63
TRAPPC6A-202ENST00000585934 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
TRAPPC6A-202ENST00000585934 KRTAP5-2Q701N4 177 aa4.81□□□□□ -1.64
TRAPPC6A-202ENST00000585934 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
TRAPPC6A-202ENST00000585934 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
TRAPPC6A-202ENST00000585934 KRTAP6-2Q3LI66 62 aa4.71□□□□□ -1.66
TRAPPC6A-202ENST00000585934 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
TRAPPC6A-202ENST00000585934 KRTAP5-8O75690 187 aa4.57□□□□□ -1.68
TRAPPC6A-202ENST00000585934 KTN1-AS1Q86SY8 53 aa4.57□□□□□ -1.68
TRAPPC6A-202ENST00000585934 MT3P25713 68 aa4.54□□□□□ -1.68
TRAPPC6A-202ENST00000585934 PRAC1Q96KF2 57 aa4.52□□□□□ -1.69
TRAPPC6A-202ENST00000585934 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
TRAPPC6A-202ENST00000585934 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC6A-202ENST00000585934 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
TRAPPC6A-202ENST00000585934 SVIPQ8NHG7 77 aa4.37□□□□□ -1.71
TRAPPC6A-202ENST00000585934 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
TRAPPC6A-202ENST00000585934 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
TRAPPC6A-202ENST00000585934 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
TRAPPC6A-202ENST00000585934 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
TRAPPC6A-202ENST00000585934 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
TRAPPC6A-202ENST00000585934 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
TRAPPC6A-202ENST00000585934 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
TRAPPC6A-202ENST00000585934 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
TRAPPC6A-202ENST00000585934 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
TRAPPC6A-202ENST00000585934 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
TRAPPC6A-202ENST00000585934 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
TRAPPC6A-202ENST00000585934 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC6A-202ENST00000585934 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
TRAPPC6A-202ENST00000585934 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
TRAPPC6A-202ENST00000585934 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
TRAPPC6A-202ENST00000585934 A0A0A0MQY5 61 aa3.1□□□□□ -1.91
TRAPPC6A-202ENST00000585934 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
TRAPPC6A-202ENST00000585934 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
TRAPPC6A-202ENST00000585934 INE1O15225 51 aa2.95□□□□□ -1.94
TRAPPC6A-202ENST00000585934 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
TRAPPC6A-202ENST00000585934 H3BS24 57 aa2.82□□□□□ -1.96
TRAPPC6A-202ENST00000585934 PRM1P04553 51 aa2.68□□□□□ -1.98
TRAPPC6A-202ENST00000585934 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
TRAPPC6A-202ENST00000585934 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 897.3 ms